CF834626

Overview
NameCF834626
Unique NameCF834626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_ALTMD (S-adenosylmethionine synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=metK PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.092e-32
Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M T LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E++ R+T + IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MATHLFTSESVSEGHPDKIADQISDAVLDAILEQDPRARVACETYVKTGMVLVGGEVTTSAWVDIEELTRNTVKEIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_VIBSL (S-adenosylmethionine synthetase OS=Vibrio splendidus (strain LGP32) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 68/107 (63.55%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA + QDP ++VACET  KT MVMV GE+TT A VD E+I R+T R IG+  +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDADSCAVLNTIGKQSPDINQGV 107          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_SHEPA (S-adenosylmethionine synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MVMV GE+TT A VD E+I R T R IG+T +D+G DAD C +L  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTHSDMGFDADSCAILNVIGKQSPDINQGV 107          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_SHELP (S-adenosylmethionine synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MVMV GE+TT A VD E++ R T R IG+T +D+G DAD C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEELTRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_SHEHH (S-adenosylmethionine synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MVMV GE+TT A VD E+I R T R IG+T +D+G DAD C +L  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTHSDMGFDADSCAILNVIGKQSPDINQGV 107          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_PSEHT (S-adenosylmethionine synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            M   LFTSESV+EGHPDK+ DQ+SDAVLDA L QD  ++VACET  KT MVMV GEITT A VD E+I R T R IG+T++D+G DAD C +L  I +QSPDI QGV       PEE G
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDSHARVACETYVKTGMVMVGGEITTSAWVDIEEITRKTIRDIGYTNSDMGFDADSCAILNTIGKQSPDINQGVD---RTSPEEQG 116          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            LFTSESV++GHPDK+ DQ+SDA+LDA +++DPD++VACET   T +V+V GEITT   VD  KIVRDT + IG+T A  G DA+ C VL  I++QSPDIAQGV   L  R
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESR 116          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            LFTSESV++GHPDK+ DQ+SDA+LDA +++DPD++VACET   T +V+V GEITT   VD  KIVRDT + IG+T A  G DA+ C VL  I++QSPDIAQGV   L  R
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESR 116          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_LISMH (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            LFTSESV++GHPDK+ DQ+SDA+LDA +++DPD++VACET   T +V+V GEITT   VD  KIVRDT + IG+T A  G DA+ C VL  I++QSPDIAQGV   L  R
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESR 116          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_LISMF (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metK PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.038e-32
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1
Query:  202 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            LFTSESV++GHPDK+ DQ+SDA+LDA +++DPD++VACET   T +V+V GEITT   VD  KIVRDT + IG+T A  G DA+ C VL  I++QSPDIAQGV   L  R
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESR 116          
The following BLAST results are available for this feature:
BLAST of CF834626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ALTMD3.092e-3263.55S-adenosylmethionine synthetase OS=Alteromonas mac... [more]
METK_VIBSL4.038e-3263.55S-adenosylmethionine synthetase OS=Vibrio splendid... [more]
METK_SHEPA4.038e-3264.49S-adenosylmethionine synthetase OS=Shewanella peal... [more]
METK_SHELP4.038e-3264.49S-adenosylmethionine synthetase OS=Shewanella loih... [more]
METK_SHEHH4.038e-3264.49S-adenosylmethionine synthetase OS=Shewanella hali... [more]
METK_PSEHT4.038e-3261.34S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_LISW64.038e-3260.00S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_LISMO4.038e-3260.00S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMH4.038e-3260.00S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMF4.038e-3260.00S-adenosylmethionine synthetase OS=Listeria monocy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05N14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834626 ID=CF834626; Name=CF834626; organism=Citrus sinensis; type=EST; length=548bp
GAAACTACAAATCCTTGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAG
CGTCTGCATATCGTCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGT
ATATCACCACCTTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATT
TCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGTCATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTG
ATACATGCAGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGC
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