CF834650

Overview
NameCF834650
Unique NameCF834650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.329e-50
Identity = 93/156 (59.62%), Postives = 113/156 (72.44%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IIS  MF+ +L + ND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKR IAAFFAQT HETTGGW  AP G YAWGYC++R+                 PG +Y+GRGPIQ++ N NY  CG  +GVDLLNNPDL+ATDPV+SFKSA+WFWMT
Sbjct:   83 IISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMT 238          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.469e-49
Identity = 87/155 (56.13%), Postives = 110/155 (70.97%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +IS + F ++L + ND  C  + FYTYDAF+ AA+AFP F N G+   +KR IAAF  QT HETTGGW  AP G YAWGYC++R+  P++              QYYGRGPIQ++WN NY +CG  +GVDLLNNPDL+ATDPV+SFK+A+WFWMT
Sbjct:   71 LISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMT 225          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.243e-48
Identity = 89/156 (57.05%), Postives = 111/156 (71.15%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I+ R++FE LLL+ ND  CPARGFYTY+AF+ AA AFP FG +GN   RKR +AAF  QT HETTGGW  AP G ++WGYC+ ++  P S            PG +YYGRGPIQL++N NY   G  +GVDLL+NPDL+ATD  +SFK+A+WFWMT
Sbjct:   92 IVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMT 247          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.121e-48
Identity = 87/156 (55.77%), Postives = 113/156 (72.44%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            ++S+E+FE LLL+ NDA CPARGFYTYDA + AA AFP F  +G++  RKR +AAF  QT HETTGGW  AP G Y+WGYC+  ++   +S           P  +Y+GRGPIQL++N NY   GE +G DLLNNP+L+A+DPV+SFK+A+WFWMT
Sbjct:   89 VVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMT 244          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.770e-48
Identity = 91/156 (58.33%), Postives = 111/156 (71.15%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IIS  MF+ +L + ND  C  + FYTY+AFI AA++F GFG +G+ T RKR +AAFFAQT HETTGGW  AP G YAWGYCY+R+     S           PGQ YYGRGPIQ+++N NY  CG  +G +LLNNPDL+AT+ V+SFKSAIWFWMT
Sbjct:   88 IISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMT 243          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 3.618e-48
Identity = 89/154 (57.79%), Postives = 108/154 (70.13%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWM 585
            II +  F+ LL + NDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKR IAAF  QT HETTGGW DAP G YAWGYCY++++                  QY GRGPIQL+WN NY  CG+ L + LL  P+L+ TDPV+SFK+AIWFWM
Sbjct:   92 IIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWM 245          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.171e-48
Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 1
Query:  127 ISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IS  MF+ +L + N+  C  + FY+Y+AFI AA++FPGFG SG+   RKR IAAFFAQT HETTGGW  AP G YAWGYC++R+                 PG +Y+GRGPIQ++ N NY  CG  +GVDLLNNPDL+ATDPV+SFK+A+WFWMT
Sbjct:   83 ISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMT 237          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.171e-48
Identity = 89/156 (57.05%), Postives = 111/156 (71.15%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I+SR +F+ +LL+ ND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR +AAF AQT HETTGGW  AP G +AWGYC+ ++    S+           PG+ YYGRGPIQL+ N NY   G  +GVDLL NPDL+ATDP +SFK+A+WFWMT
Sbjct:   83 IVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMT 238          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.375e-47
Identity = 90/157 (57.32%), Postives = 111/157 (70.70%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +IS  MF+ +L + ND  C  +G FY+Y+AFI AA +FPGFG +G+ T RKR IAAFFAQT HETTGGW  AP G YAWGYC++R+                 PG +Y+GRGPIQ++ N NY  CG  +GVDLLNNPDL+ATD ++SFKSAIWFWMT
Sbjct:   69 VISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMT 225          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.796e-47
Identity = 91/157 (57.96%), Postives = 111/157 (70.70%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +IS  MF+ +L + ND  C  +G FY+Y+AFI AA +FPGFG +G+ T RKR IAAFFAQT HETTGGW  AP G YAWGYC++R+                 PG +Y+GRGPIQ++ N NY  CG  +GVDLLNNPDL+ATD V+SFKSAIWFWMT
Sbjct:   71 VISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMT 227          
The following BLAST results are available for this feature:
BLAST of CF834650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI1_TOBAC1.329e-5059.62Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI2_PEA1.469e-4956.13Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI2_ORYSJ1.243e-4857.05Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI9_ORYSJ2.121e-4855.77Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_TOBAC2.770e-4858.33Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI6_POPTR3.618e-4857.79Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHIT_SOLTU6.171e-4856.77Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHIA_SECCE6.171e-4857.05Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI2_SOLTU1.375e-4757.32Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_SOLTU1.796e-4757.96Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834650 ID=CF834650; Name=CF834650; organism=Citrus sinensis; type=EST; length=589bp
TTACTAATTTTCTCTCTACCCTTATCTTTTGTACTAGGAGGTTCAGCACA
GAATTGTGGAACCGGCGTTGTGTGCGGTGAACGTGATACTGGCCTCGGGA
CGGATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGAAGAC
TTGCTTCTGTATATAAATGATGCCCGATGCCCTGCCAGAGGCTTCTACAC
TTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAACT
CTGGAAATGAAACCATGCGTAAAAGATAAATTGCTGCCTTTTTTGCCCAA
ACTGGCCATGAAACTACTGGGGGATGGACCGATGCACCTGGTGGAGAATA
TGCTTGGGGATATTGCTATATTAGGCAAGTTATCCCTGCGTCGTCCGACT
ACTGTTATCCTTACTGTCCATGTCCCTTGCCAGGGCAATACTATGGCCGA
GGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAAC
CTTGGGGGTGGACTTGTTGAACAATCCAGACCTACTTGCCACTGATCCAG
TACTATCCTTCAAGTCAGCAATCTGGTTCTGGATGACTG
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