CF834650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.577e-43 Identity = 84/157 (53.50%), Postives = 110/157 (70.06%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGV--DLLNNPDLLATDPVLSFKSAIWFWMT 588 I++RE+FE +L + N+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HET GG G + GYC++RQ+ + +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMT Sbjct: 30 IVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMT 168
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.807e-43 Identity = 85/157 (54.14%), Postives = 111/157 (70.70%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGV--DLLNNPDLLATDPVLSFKSAIWFWMT 588 I++RE+FE +L + N+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HET GG G + GYC+++Q+ SD +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Sbjct: 30 IVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQI--EQSD------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMT 168
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 5.060e-42 Identity = 82/159 (51.57%), Postives = 104/159 (65.41%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXX---LPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 I+SR +F+ +LL+ NDA CPA FYTYDAF+ AA AFPGF +G + KR +AAF AQT HETTGGW AP G YAWGYC+ + A+ +YYGRGPIQL++N NY G+ +G DLL +PDL+A+D +SF +A WFWMT Sbjct: 84 IVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMT 242
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 6.609e-42 Identity = 80/157 (50.96%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 IIS +F+ +LL+ ND C A+GFYTYDAF+ AA A+P F +G+ KR +AAF AQT HETTGGW AP G Y+WGYC+ + + +YYGRGPIQ+T+N NY G+ +G DLLNNPDL+A+D +SFK+A WFWMT Sbjct: 79 IISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMT 235
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.127e-41 Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 22 LSFVLGGSAQNCGTGVVCXXXXXXXXXXXXXXXKIISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 L F+ G AQ+ GT I++ ++F ++L ND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HETTGG A G +A GYC++R+ + +YGRGPIQLT NY G+ +G DL+NNPDL+ATD +SFK+AIWFWMT Sbjct: 8 LLFLTGSFAQDVGT--------------------IVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVRE-------------GNQMGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT 162
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.777e-40 Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 I++ ++F+ +L NDARC A FYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HETTGG T +P G YA GYC++R+ + YYGRGPIQLT NY G+ + DL+NNPDL+ATD +SFK+AIWFWMT Sbjct: 29 IVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLRE-------------GNQMGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMT 169
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.777e-40 Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 I++ ++F ++L ND RCPA GFYTYDAFI AA +FPGFG SG++T R++ IAAFF QT HETTGG A + GYC++RQ SD +YYGRGPIQLT NY + G + DL+NNPDL+ATD +SFK+AIWFWMT Sbjct: 30 IVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMT 168
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.626e-40 Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 I++ ++F ++L ND RCPA GFYTYDAFI AA +FPGFG +G++T R++ IAAFF QT HETTGG A + GYC++RQ SD +YYGRGPIQLT NY + G +G +L+NNPDL+ATD +SFK+AIWFWMT Sbjct: 30 IVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMT 168
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.800e-39 Identity = 76/157 (48.41%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 I+S +++ L L+ +DA CPARGFYTY +F+ AA FP F +G RKR +AAF AQ HETTGGW AP G YAWG CY ++ P SS D Y+GRGPIQ++WN NY G+ LG D L NP+++A ++F++A+WFWMT Sbjct: 52 IVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMT 208
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.433e-38 Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = 1 Query: 124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588 +I++ +F +L ++++CPARGFYTYDAFI AA +FP FG SG + +R +AAFF QT HETTGG T ++ WGYC+ ++ A+S YYGRGPIQLT NY G LG+DL+ NPDL++TD V+SFK+AIWFWMT Sbjct: 35 VITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMT 177 The following BLAST results are available for this feature:
BLAST of CF834650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834650 ID=CF834650; Name=CF834650; organism=Citrus sinensis; type=EST; length=589bpback to top |