CF834650

Overview
NameCF834650
Unique NameCF834650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.577e-43
Identity = 84/157 (53.50%), Postives = 110/157 (70.06%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGV--DLLNNPDLLATDPVLSFKSAIWFWMT 588
            I++RE+FE +L + N+  CPA+GFYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HET GG      G +  GYC++RQ+  +               +YYGRGPIQLT   NY R G+ +GV  DL+NNPDL+ATDP++SF++AIWFWMT
Sbjct:   30 IVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMT 168          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.807e-43
Identity = 85/157 (54.14%), Postives = 111/157 (70.70%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGV--DLLNNPDLLATDPVLSFKSAIWFWMT 588
            I++RE+FE +L + N+  CPA+GFYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HET GG      G +  GYC+++Q+    SD            +YYGRGPIQLT   NY R G+ +GV  +L+NNPDL+ATDP++SFK+AIWFWMT
Sbjct:   30 IVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQI--EQSD------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMT 168          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 5.060e-42
Identity = 82/159 (51.57%), Postives = 104/159 (65.41%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXX---LPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I+SR +F+ +LL+ NDA CPA  FYTYDAF+ AA AFPGF  +G +    KR +AAF AQT HETTGGW  AP G YAWGYC+  +   A+                 +YYGRGPIQL++N NY   G+ +G DLL +PDL+A+D  +SF +A WFWMT
Sbjct:   84 IVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMT 242          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.609e-42
Identity = 80/157 (50.96%), Postives = 103/157 (65.61%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IIS  +F+ +LL+ ND  C A+GFYTYDAF+ AA A+P F  +G+    KR +AAF AQT HETTGGW  AP G Y+WGYC+  +    +                +YYGRGPIQ+T+N NY   G+ +G DLLNNPDL+A+D  +SFK+A WFWMT
Sbjct:   79 IISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMT 235          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.127e-41
Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 1
Query:   22 LSFVLGGSAQNCGTGVVCXXXXXXXXXXXXXXXKIISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            L F+ G  AQ+ GT                    I++ ++F ++L   ND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HETTGG   A  G +A GYC++R+                +   +YGRGPIQLT   NY   G+ +G DL+NNPDL+ATD  +SFK+AIWFWMT
Sbjct:    8 LLFLTGSFAQDVGT--------------------IVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVRE-------------GNQMGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT 162          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.777e-40
Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I++ ++F+ +L   NDARC A  FYTYDAFI AA +FPGFG +G++T RK+ IAAFF QT HETTGG T +P G YA GYC++R+                +   YYGRGPIQLT   NY   G+ +  DL+NNPDL+ATD  +SFK+AIWFWMT
Sbjct:   29 IVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLRE-------------GNQMGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMT 169          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.777e-40
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I++ ++F ++L   ND RCPA GFYTYDAFI AA +FPGFG SG++T R++ IAAFF QT HETTGG   A    +  GYC++RQ     SD            +YYGRGPIQLT   NY + G  +  DL+NNPDL+ATD  +SFK+AIWFWMT
Sbjct:   30 IVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMT 168          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.626e-40
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I++ ++F ++L   ND RCPA GFYTYDAFI AA +FPGFG +G++T R++ IAAFF QT HETTGG   A    +  GYC++RQ     SD            +YYGRGPIQLT   NY + G  +G +L+NNPDL+ATD  +SFK+AIWFWMT
Sbjct:   30 IVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMT 168          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.800e-39
Identity = 76/157 (48.41%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            I+S +++  L L+ +DA CPARGFYTY +F+ AA  FP F  +G    RKR +AAF AQ  HETTGGW  AP G YAWG CY  ++ P SS  D             Y+GRGPIQ++WN NY   G+ LG D L NP+++A    ++F++A+WFWMT
Sbjct:   52 IVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMT 208          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.433e-38
Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +I++ +F  +L   ++++CPARGFYTYDAFI AA +FP FG SG    + +R +AAFF QT HETTGG T     ++ WGYC+  ++  A+S              YYGRGPIQLT   NY   G  LG+DL+ NPDL++TD V+SFK+AIWFWMT
Sbjct:   35 VITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMT 177          
The following BLAST results are available for this feature:
BLAST of CF834650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHIA_SOLCI4.577e-4353.50Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIA_SOLLC7.807e-4354.14Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI12_ORYSJ5.060e-4251.57Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI3_ORYSJ6.609e-4250.96Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_SOLLC1.127e-4147.09Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIT_PETHY2.777e-4053.55Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIP_TOBAC2.777e-4053.55Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIQ_TOBAC3.626e-4052.90Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHI10_ORYSJ1.800e-3948.41Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI8_ORYSJ4.433e-3850.00Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834650 ID=CF834650; Name=CF834650; organism=Citrus sinensis; type=EST; length=589bp
TTACTAATTTTCTCTCTACCCTTATCTTTTGTACTAGGAGGTTCAGCACA
GAATTGTGGAACCGGCGTTGTGTGCGGTGAACGTGATACTGGCCTCGGGA
CGGATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGAAGAC
TTGCTTCTGTATATAAATGATGCCCGATGCCCTGCCAGAGGCTTCTACAC
TTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAACT
CTGGAAATGAAACCATGCGTAAAAGATAAATTGCTGCCTTTTTTGCCCAA
ACTGGCCATGAAACTACTGGGGGATGGACCGATGCACCTGGTGGAGAATA
TGCTTGGGGATATTGCTATATTAGGCAAGTTATCCCTGCGTCGTCCGACT
ACTGTTATCCTTACTGTCCATGTCCCTTGCCAGGGCAATACTATGGCCGA
GGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAAC
CTTGGGGGTGGACTTGTTGAACAATCCAGACCTACTTGCCACTGATCCAG
TACTATCCTTCAAGTCAGCAATCTGGTTCTGGATGACTG
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