CF834650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 178 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWM 585 C + FYT AF+ A + +PGF + G++ KR IAAFFA HET +CYI ++ +++ D +YYGRGP+Q++WN NY G +G D L +P +A D V++FK+A+WFWM Sbjct: 89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWM 213
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.410e-22 Identity = 56/139 (40.29%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 178 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWM 585 C + FYT +F+ AA ++ GF KR IAAFFA HET CYI ++ AS D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM Sbjct: 107 CAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.410e-22 Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 178 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWM 585 C + FYT D+FI AA FP F NS + +R IA FA HET +CYI ++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM Sbjct: 92 CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWM 213
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.453e-22 Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 178 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWM 585 C + FYT AF+ A A+PGF + G E KR IAAFFA HET +CYI ++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM Sbjct: 100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.871e-20 Identity = 55/143 (38.46%), Postives = 73/143 (51.05%), Query Frame = 1 Query: 169 DARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWM 585 D+ C + FYT DAF+ A ++ FG G+E KR IAA FA HET +CYI ++ AS D P Y+GRGPIQL+WN NY G D L P+ ++ D V+SFK+A+W+WM Sbjct: 85 DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of CF834650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834650 ID=CF834650; Name=CF834650; organism=Citrus sinensis; type=EST; length=589bpback to top |