CF834653

Overview
NameCF834653
Unique NameCF834653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.860e-18
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = -1
Query:   50 AKGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMA 298
            AK A+ +++KA IK ASE  +KGILGYT++ VV +DF+GD+ SSIFDA  GI  S  F KLV+W+  E+GY  RV D++E +A
Sbjct:  247 AKEATYDEIKAVIKKASENELKGILGYTEDAVVSSDFLGDTNSSIFDAAAGIQLSPKFVKLVTWYDNEYGYSTRVVDLVELVA 329          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = -1
Query:   50 KGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMA 295
            KGAS + +K  IK ASEG +KGILGYT++ VV  DF+G + SS+FDA+ GI  +  F KL+SW+  E+GY  RV D+I ++A
Sbjct:  250 KGASYDQIKEVIKKASEGELKGILGYTEDEVVSTDFLGSTESSVFDAKAGIPLNDKFVKLISWYDNEYGYSRRVCDLIAYVA 331          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18
Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = -1
Query:   50 KGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMA 295
            K AS E++  AIK ASEG +KG+LGYT++ VV  DF+G S SSIFD + GI  S +F KL+SW+  E+GY  +V D++EH+A
Sbjct:  250 KAASYEEIAPAIKKASEGPLKGVLGYTEDAVVSTDFLGSSYSSIFDEKAGILLSPTFVKLISWYDNEYGYSTKVVDLLEHVA 331          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = -1
Query:   50 AKGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMA 298
            AK A+ E++KA +K ASE  +KG++GYT++ VV +DF+GD+ SSIFDA  GI  S  F KLVSW+  E+GY  RV D++E +A
Sbjct:  247 AKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVA 329          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.736e-18
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = -1
Query:   50 AKGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMA 298
            AK A+ E++KA +K ASE  +KG++GYT++ VV +DF+GD+ SSIFDA  GI  S  F KLVSW+  E+GY  RV D++E +A
Sbjct:  247 AKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVA 329          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18
Identity = 41/82 (50.00%), Postives = 63/82 (76.83%), Query Frame = -1
Query:   50 KGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMA 295
            K A+ +++KAA+K A+EG +KG++GYT++ VV +DF+ D+ SSIFDAE GI  S  F KL++W+  E+GY  RV D++E++A
Sbjct:  250 KDATYDEIKAAVKEAAEGPLKGVVGYTEDQVVSSDFLTDNRSSIFDAEAGIWLSPRFVKLIAWYDNEYGYSTRVVDLLEYVA 331          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18
Identity = 41/84 (48.81%), Postives = 61/84 (72.62%), Query Frame = -1
Query:   44 KGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMALV 295
            KGA+ +++K A+K A++G + GILGYT++ +V  D  GD+ SSIFDA+ GI  + +F KLVSW+  EWGY  RV D++ ++A V
Sbjct:  250 KGATYDEIKEAVKAAADGPLNGILGYTEDEIVSTDLNGDTRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAKV 333          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18
Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = -1
Query:   56 AS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEH 289
            A+ E++  A++ A+ G +KG+LGYTDE VV +DFVG+  SSIFDA+ GI    +F KLVSW+  EWGY NRV D++ H
Sbjct:  257 ATYEEICNAVREAANGELKGVLGYTDEQVVSSDFVGEPMSSIFDAKAGIALDKTFVKLVSWYDNEWGYSNRVVDLLLH 334          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = -1
Query:   53 KGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHM 295
            K A+ +++KA +  AS+G MKGIL YT+E VV  DFVGD+ SS+FDA+ GI  +  F KL+SW+  E+GY NRV D+I++M
Sbjct:  248 KSATYDEIKAKVLEASQGPMKGILDYTEEEVVSTDFVGDTHSSVFDAKAGIPLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328          
BLAST of CF834653 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18
Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = -1
Query:   38 KGAS*EDVKAAIKYASEGSMKGILGYTDEHVVFNDFVGDSGSSIFDAEVGIGSSASFRKLVSWFGFEWGYINRVWDIIEHMALVGA 295
            K  S +++K A+K ASE  +KGILGYT++ +V +D  GD  SSIFDA+ GI  +++F KLVSW+  EWGY  RV D+I +++ V A
Sbjct:  250 KATSYDEIKKALKDASENELKGILGYTEDDIVSSDLNGDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVVDLIAYISKVDA 335          
The following BLAST results are available for this feature:
BLAST of CF834653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
G3P2_KLULA2.860e-1854.22Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_CRYCU3.736e-1852.44Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_CANAL3.736e-1853.66Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3P3_KLUMA3.736e-1853.01Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA3.736e-1853.01Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_PICCI4.879e-1850.00Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_PHANO4.879e-1848.81Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_MASBA4.879e-1853.85Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P_GLOMM4.879e-1853.09Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_ASPNG4.879e-1850.00Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834653 ID=CF834653; Name=CF834653; organism=Citrus sinensis; type=EST; length=298bp
TGCACCCACCCCAAACCGGTTTTACTGTTTAGTTGGGGGCCCCTACCAAT
GCCATGTGCTCAATGATGTCCCACACTCGATTGATGTATCCCCACTCGAA
GCCGAACCATGACACAAGCTTCCTGAAGGATGCACTCGATCCAATCCCAA
CCTCCGCATCAAATATACTTGACCCCGAGTCTCCAACAAAGTCATTAAAT
ACAACATGCTCATCTGTGTATCCAAGAATGCCTTTCATCGAACCCTCCGA
TGCATACTTTATGGCGGCTTTGACATCTTCCTAGGAAGCACCCTTTGC
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