CF834661

Overview
NameCF834661
Unique NameCF834661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = -2
Query:  295 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFRPQL 513
            Y  GIG GVYDI  PR+PS EE+ + I + L VL  ++  VNPD G KTR   E   AL NMV  A+  R +L
Sbjct:  680 YEKGIGLGVYDIHSPRVPSEEEMLNVIRRALTVLPASLFWVNPDCGLKTRAEKETVAALKNMVAAARAAREEL 752          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = -2
Query:  304 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFR 513
            Y   IGPG+YDI  PR+PS EE+ ++I  ++ VL  + L +NPD G KTRK  E + +LSNMV  A+  R
Sbjct:  686 YKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAAQHIR 755          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = -2
Query:  295 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFRPQL 513
            +  G+GPGVYDI  PR+P  EEIA  + + L  +    L VNPD G KTR   E + +L N+V  AKL R +L
Sbjct:  681 FDLGVGPGVYDIHSPRVPGVEEIAASLREALKAVPVERLWVNPDCGLKTRGPAEVEASLRNLVDAAKLVRAEL 753          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_ACIF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = -2
Query:  304 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFR 513
            Y   IGPGVYDI  PR+PS EE+   + K + V+    L +NPD G KTRK  E  PAL NMV  A+  R
Sbjct:  711 YPNEIGPGVYDIHSPRVPSVEEMVGLMEKAVKVVPAERLWINPDCGLKTRKWAEVTPALENMVEAARQVR 780          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = -2
Query:  304 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFR 513
            Y   IGPGVYDI  PR+PS EE+   + K + V+    L +NPD G KTRK  E  PAL NMV  A+  R
Sbjct:  711 YPNEIGPGVYDIHSPRVPSVEEMVGLMEKAVKVVPAERLWINPDCGLKTRKWAEVTPALENMVEAARQVR 780          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = -2
Query:  304 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFR 513
            Y   IGPGVYDI  PR+PS EE+ + I   L  LE + + VNPD G KTR+  E +P+L NMV  A+  R
Sbjct:  695 YPNEIGPGVYDIHSPRVPSVEEMEELIRTALDALEPSQMWVNPDCGLKTRRWVEVQPSLENMVQAAENVR 764          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = -2
Query:  286 KYGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFRPQLASA 516
            +Y   IGPGVYDI  PR+PS  EI   ++K L V+    L VNPD G KTR   E + AL+ MV V +  R +LA A
Sbjct:  683 RYPNAIGPGVYDIHSPRVPSAAEIRALLDKALRVIPAERLWVNPDCGLKTRGWPEVEAALAAMVAVGRELREKLAQA 759          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = -2
Query:  289 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFRPQLAS 513
            Y  GIG GVYDI  PRIP+ EEI   IN+ L  ++ ++  VNPD G KTRK  E K AL+ +V   K  R +  S
Sbjct:  671 YDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = -2
Query:  289 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFRPQLAS 513
            Y  GIG GVYDI  PRIP+ EEI   IN+ L  ++ ++  VNPD G KTRK  E K AL+ +V   K  R +  S
Sbjct:  671 YDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745          
BLAST of CF834661 vs. ExPASy Swiss-Prot
Match: METE_BACSU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus subtilis GN=metE PE=1 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = -2
Query:  298 YGAGIGPGVYDIPFPRIPSTEEIADRINKMLAVLETNILGVNPDWGFKTRKSTEGKPALSNMVVVAKLFRPQ 513
            Y  G+G GVYDI  PR+PSTEE+ + I   LAV  T+   VNPD G KTR+  E   AL NMV  AK  R Q
Sbjct:  686 YLKGLGLGVYDIHSPRVPSTEEMYNIIVDALAVCPTDRFWVNPDCGLKTRQQEETVAALKNMVEAAKQARAQ 757          
The following BLAST results are available for this feature:
BLAST of CF834661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
METE_BACHD2.024e-1149.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM3.452e-1148.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR4.509e-1146.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF54.509e-1150.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF24.509e-1150.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD5.888e-1150.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO5.888e-1148.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAES7.691e-1148.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ7.691e-1148.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACSU7.691e-1152.785-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834661 ID=CF834661; Name=CF834661; organism=Citrus sinensis; type=EST; length=517bp
TTTTTTTTTTTTTTTTTCTCTTTGCAAAACCAGTAAAGGGATTCCATCGA
TTTACGGCCCCTGATAGCAAGCCGGGGCCTTTAAAAACGGAAAATACCAG
CAAAGAAAAATAGAAGCCAATTGCTCAATAATGCATAATATGCATACGGA
AAATTTTCATCACATCACGACCCACGGGTATTCCAATAGGGAATAAAACA
GGAATTTTCTTTCTTTGTTTAAAGGGAAAAAAAAAAAAATCAATGGGTCC
GGAAATATCCCTCCAATCTCCAAAACCACTCACTTGGCACTGGCAAGCTG
GGGGCGGAATAACTTGGCAACAACCACCATGTTTGAAAGGGCTGGCTTCC
CCTCAGTGGACTTGCGAGTCTTAAAACCCCAGTCAGGGTTAACCCCCAAA
ATGTTGGTTTCTAACACAGCAAGCATCTTGTTGATTCTGTCAGCAATTTC
TTCAGTTGATGGGATTCTTGGAAAGGGGATGTCATACACACCAGGGCCAA
TTCCCGCACCATACTTG
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