CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 76/184 (41.30%), Postives = 104/184 (56.52%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+ G+V+G+NIW N+
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 76/184 (41.30%), Postives = 104/184 (56.52%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+ G+V+G+NIW N+
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 80/188 (42.55%), Postives = 104/188 (55.32%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVR-GTKTL-ELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPELGPD  FS  S K V E++EA  LG    PVL+GP++YLLL+K A GVA  F              E++++L+AAGA+W+Q DEP LV D    +L+A + AY EL        +LV +YF  +  EA   L     V     D    G   L +L  +G   GK L AGVV+GRNIW ND A
Sbjct:  128 YLVPELGPDTVFSADSAKQVAEFREALALGWTPRPVLVGPLTYLLLAKAAPGVAADFEPLTLLDRLLPVYAEILADLRAAGATWVQLDEPALVQDRTPAELNAAARAYRELGGRADRPQLLVASYFGRL-GEALAVLAKAP-VDGLALDFTESGAGNLDDLAAAGGLPGKRLVAGVVNGRNIWINDYA 313          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRR6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metE PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.411e-29
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL +TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+ G+V+G+NIW N+
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSFVAAYQEVFAKLADLGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLFQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.411e-29
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL +TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+ G+V+G+NIW N+
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSFVAAYQEVFAKLADLGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLFQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.760e-29
Identity = 75/184 (40.76%), Postives = 102/184 (55.43%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP +  D +   A HK   E++EAK LG+ T PVLIGP + L L+   +G+  T               +V  +L   GA  IQ DEP LV DL + +   F   Y  L +   GL VL++TYF DV  + +  LTSL  V A G D V G +T  L+ +GFPA K L+AG+V+G+NIW N+
Sbjct:  122 YIVPAIEKDTEIKLAGHKIFDEFQEAKNLGITTRPVLIGPFTLLQLTDFEEGLTAT----NFADSLVAAYGQVFEKLAELGAEKIQLDEPSLVKDLTAEEKALFLRIYQTLLADKKGLQVLIQTYFGDV-RDIYTELTSLP-VDAIGLDFVEGKETAALVATGFPADKTLYAGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.676e-28
Identity = 72/185 (38.92%), Postives = 93/185 (50.27%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE  P+  F  A  KA+ E+ EAK LGV T PVL+GP S+L   K  K     F               V+  L  AGA W+Q DEP LV++L S  L     AY+ L +    L ++V TYF  +P  + +T  +L  V     D+VRG    E   S  P  K L  G+VDGRNIW  D+
Sbjct:  122 YIVPEFSPETNFRLAFTKAIDEFAEAKALGVHTRPVLVGPFSFL---KLGKATVAGFDPLDLMGRLLPVYENVLKRLAEAGADWVQIDEPCLVLELGSGDLAKCRAAYSALSAAAPSLKLMVATYFGALPEASLETAMALP-VAGIHLDMVRGRSQYEAALSALPRDKLLSLGLVDGRNIWRTDM 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.128e-27
Identity = 71/185 (38.38%), Postives = 97/185 (52.43%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE      F  AS K + EY+EAK LG +T PVL+GPV+YL L K A                     E++  L AAGA W+Q DEP LV+DLD  +  AF +AY ++   L  L++++ TYF  +  +   T  +L  +     DLVR  K +  + +  P    L  GVVDGRNIW  DL
Sbjct:  148 YMVPEFSAGQSFQLASLKPLEEYREAKALGYDTRPVLLGPVTYLKLGKSADA---RLDVLSLLPKLVPVYIEILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTTYFGGL-GDNLDTALALP-IAGLHLDLVRAPKQINAVIAKGPKDLVLSLGVVDGRNIWRADL 327          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.128e-27
Identity = 77/186 (41.40%), Postives = 103/186 (55.38%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE   D  FS    + +++ +EA+ LGV   PVL+GP+S L L K AKG  + F              E++S L+AAGA W Q DEP+L +DL+   L AF+ AYA+L      L  L+ TYF DV   A + L SL  V     DLVR  + +      +PA K L AG+VDGRNIW  DL+
Sbjct:  121 YLVPEWHADTAFSAQPERLLSQLREARALGVAAKPVLLGPLSLLWLGK-AKG--RPFDRLALLPGLVAAYRELLSSLRAAGAEWAQIDEPILALDLEPSWLDAFAPAYAQLSRHAPKL--LLATYFGDVSEHAAR-LKSLP-VAGLHLDLVRAPEQISAFLPDYPADKVLSAGIVDGRNIWRADLS 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.391e-27
Identity = 71/185 (38.38%), Postives = 97/185 (52.43%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE      F  AS K + EY+EAK LG +T PVL+GPV+YL L K A                     E++  L AAGA W+Q DEP LV+DLD  +  AF +AY ++   L  L++++ TYF  +  +   T  +L  +     DLVR  K +  + +  P    L  GVVDGRNIW  DL
Sbjct:  148 YMVPEFSAGQSFQLASVKPLEEYREAKALGYDTRPVLLGPVTYLKLGKSADAGLDVLSLLPKLVPVYI---EILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTTYFGGL-GDNLDTALALP-IAGLHLDLVRAPKQINAVIAKGPKDLVLSLGVVDGRNIWRADL 327          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_STRPN1.980e-2941.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP41.980e-2941.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG1.980e-2942.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRR64.411e-2941.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP24.411e-2941.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSY5.760e-2940.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PARL11.676e-2838.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPT4.128e-2738.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO4.128e-2741.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPA5.391e-2738.385-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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