CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BACLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.054e-18
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGT-KTLELIKS-GFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE     ++    +K + +Y+ AK  LG ET PV++G  +++ L   AKG  +                +V+ EL+  G  W+Q DEP LV      +  A  E Y  +   +S LN+L++TYF  V  +A++ L S   V   G D V    K  E +K+ GFP  K L AG++DGRNIW  +L
Sbjct:  120 YIVPEYEKGAQYRVTRNKPLQDYQRAKAALGTETKPVILGLYTFVAL---AKGYEQQ-DIKDIYNQMTPLYIQVLKELEQEGVKWVQIDEPALVT-ASPEEAAAVKEIYQTITEEVSELNILLQTYFDSV--DAYEELISFP-VAGIGLDFVHDKGKNFEHLKAHGFPKDKVLAAGILDGRNIWKANL 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_TRIEI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 68/183 (37.16%), Postives = 96/183 (52.46%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKS-GFPAGKYLFAGVVDGRNIW 544
            ++VPE+ PD+         +   K AK + G   VP++I P++++ LS+      ++               +++++LK  G S IQ  EP LV    S+    F  AYAEL     GLN+ + TYF D+  E +  +  L  VT+   DL RG + LELIKS GFPA K L AGVVD RNIW
Sbjct:  118 YLVPEITPDITPKADFSDFLETVKRAKKIIGKSAVPIIISPITFIRLSR-----LESVEFDNILAQLLPLYSDLLTKLKKLGISEIQLHEPALVFGDSSNLKKQFEMAYAELAKV--GLNIHLVTYFDDL-GETYPWVMKLP-VTSISLDLTRG-QNLELIKSYGFPADKTLGAGVVDARNIW 290          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 64/185 (34.59%), Postives = 86/185 (46.49%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F+ +  +   E  EA  LG    PVLIGP++YL L K  KG    F              E+   L A G  W+Q DEP+LV+DL     +AF  AY  ++        L+ TYF  +  E    L +   V     DLVR  +    I    PA K L  G+V+GRN+W  DL
Sbjct:  130 YLVPEFSADQQFALSWEQLFEEVAEAHALGHSVKPVLIGPLTYLWLGK-EKG--SDFDRLDLLERLLPVYGEIFQRLAAQGVEWVQIDEPILVLDLPQAWKNAFERAYNLIQR--EPCKKLIATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKVLSLGMVNGRNVWRCDL 307          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 69/185 (37.30%), Postives = 86/185 (46.49%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D  FS +  +   E  EA  LG    PVLIGP+SYL L K AKG    F              E+   L A G  W+Q DEP+LV+DL     +AF  AY  ++     L  LV TYF  +  E    L +   V     DLVR       I    PA K L  G+V+GRN+W  DL
Sbjct:  125 YLVPEFTVDQAFSLSWTQLFEEVDEALALGHAVKPVLIGPLSYLWLGK-AKG--GEFDRLELLERLLPVYGEIFQGLAARGVEWVQIDEPILVLDLPQAWKNAFERAYNLIQR--EPLKKLVATYFGGL--EDNLGLAAGLPVDGLHIDLVRAPGQYPTILDRLPAYKVLSLGLVNGRNVWRCDL 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 66/185 (35.68%), Postives = 85/185 (45.95%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE+ P   FS    K + E KEA    + + PV+IGPV++LLLSK   G                    +++E    GA W+QFDEP LV DL           Y  L S      + V TYF + P  +   L     + A G D V G  T  +      AGK L AG+VDGRNIW  DL
Sbjct:  126 YLVPEIEPATTFSLNPGKILGELKEALEQRIPSRPVIIGPVTFLLLSKGINGGGAPIQRLEELVGIYCTLLSLLAE---NGARWVQFDEPALVTDLSPDAPALAEAVYTALGSVSKRPAIYVATYFGN-PGASLAGLARTP-IEAIGVDFVCGADT-SVAAVPELAGKTLVAGIVDGRNIWRTDL 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CAMJR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni (strain RM1221) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 62/191 (32.46%), Postives = 94/191 (49.21%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLL----SKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE       +    K   EY EAK LG+E+ PVLIG  +   L     +  + +AK                E+  +L     +W++ DEP LV DL    +  F E Y EL +    L +L+++YF D+  + +  L   K   A G D + G ++L L+ K GF   K LFAG+++G+NI+ ND A
Sbjct:  122 YLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIGIFTLFKLIAFKDEKTQKLAKE--------KLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDIALFEEFYQELLNHKKDLKILLQSYFGDL-RDIYPKLLESK-FDALGLDFIEGKQSLALVQKYGFAKDKILFAGLINGKNIYTNDYA 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BURCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 58/185 (31.35%), Postives = 85/185 (45.95%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   D  FS    + + +  EA   GV   PV++GPV+YL L K      +                 ++  L A G  W+Q DEP+LV +LD+    AF  AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA + L  G ++GRNIW  DL
Sbjct:  129 YIVPEFHADTNFSLDPSRLLQQLAEANAQGVNAKPVILGPVTYLWLGKAKDDSDR----LALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAEWRQAFRIAYAALET--RRIKLLLATYFGQLQDNL--TLAASLPVDGLHIDAINARDEVDALVRELPAERVLSVGAINGRNIWKTDL 305          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18
Identity = 63/187 (33.69%), Postives = 91/187 (48.66%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSK--PAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL P   +  A      + +EA+ LG    PV+ GP+++L L K    +  A                 +V+  L   G  W+Q DEP+L +DL +    AF  AYA+L    S + VL+ TYF D   +   T+T L  V     DLVR  + L+ +     A + L AGV++GRN+W  DL
Sbjct:  125 YIVPELVPGQTYRIAREDLFEQVREAQALGYAVKPVIPGPLTWLYLGKGDAFQQGASDEDKLKLLANLLPVYQQVLKRLADQGVEWVQIDEPILALDLPAAWRDAFGLAYAQLAG--SPVKVLLATYF-DGLKDNLSTVTKLP-VAGLHVDLVRAPEQLDDVVEALHADQVLSAGVINGRNVWRTDL 307          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18
Identity = 63/185 (34.05%), Postives = 94/185 (50.81%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE     +F  +  + + E  EA  LG +  PVL+GPV+YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L    L AF  AY  L+     + +L+ TYF  V ++   T+ +L  V     DLV G   +  + +  PA   L AG+++GRN+W  DL
Sbjct:  125 YMVPEFVKGQQFKLSWTQLLDEVDEALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLTLLNTILPVYQQVLAELAKRGIDWVQIDEPALVLELPPAWLEAFQPAYDALQGQ---VKLLLTTYFEGV-SDNLATIAALP-VQGLHVDLVHGKDDVAELHNRLPADWLLSAGLINGRNVWRADL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18
Identity = 57/185 (30.81%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE     +F     + + E  EA  LG    P+L+GP+SYL L K  +   K F              ++++ L   G  W+Q DEP LV++L +   +A+ +AY +    L G + L+ T + D        +T+L  V     DL+ G   +E++    P+   L AGV++GRN+W  DL
Sbjct:  125 YIVPEFTVGQQFRLGWTQLIEEVDEALALGYNIKPILLGPISYLWLGKAKE---KHFDRLSLLSALLPVYQQILALLAQRGIEWVQIDEPALVLELPTAWCNAYYDAYTD---ALQGYSKLLLTTYFDSIGHHLNIITNL-SVHGLHVDLIAGNDDVEVLHRTLPSNWVLSAGVINGRNVWRADL 302          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_BACLD2.054e-1834.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_TRIEI2.682e-1837.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY2.682e-1834.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA72.682e-1837.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE2.682e-1835.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJR2.682e-1832.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCC2.682e-1831.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA12.682e-1833.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP73.503e-1834.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH3.503e-1830.815-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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