CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPE   D  F  +  +   E  EA   G +  PVL+GPVSYL L K    V + F               ++++L + G  W+Q DEP+L ++L+     AF  AY  +    S + VL+ TYF D   +    +  L  V     DL    + L+ + +  P G  L AGVV+GRN+W +DL+
Sbjct:  126 YIVPEFSKDDTFEVSWPQLFEEINEAVQAGHKVKPVLLGPVSYLYLGKE---VEEGFDRLTLLPRLLTAYQAILAKLASQGVEWVQIDEPILSLELEKQWADAFKLAYQLIR---SDVKVLLTTYF-DSVTDTLDKIVELP-VDGLHVDLSAAPQQLDDVVAKLPEGWVLSAGVVNGRNVWRSDLS 303          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 63/186 (33.87%), Postives = 90/186 (48.39%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE     +F     + + E  EA  LG +  PVL+GPV+YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L    L+AF  AY  L+     + +L+ TYF D       TL  L  V     DLV G   + ++    P    L  GV++GRN+W  DL+
Sbjct:  125 YMVPEFHKGQQFKLGWSQLLDEVDEALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAYDALQGQ---VKLLLTTYF-DSVGHNLDTLRELP-VQGLHVDLVGGHDDIAVLNKALPKEWLLSLGVINGRNVWRADLS 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 62/185 (33.51%), Postives = 88/185 (47.57%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F+ +  +   E +EAK LG    PV+IGP++YL L K  KG    F              ++++ L   G  W+Q DEP+L +DL     +A+   Y  L+   + L  L+ TYF  +  E    L +   V     DLVR       I    PA K L  GVV+GRN+W  DL
Sbjct:  126 YLVPEFTADQQFALSWEQLFEEVEEAKALGHAVKPVVIGPLTYLWLGK-TKGA--DFDKLELLDRLLPLYDQILNRLAVQGVEWVQIDEPILALDLPQDWKNAYERVYNILQR--APLKKLIATYFGGL--EDNLGLAANLPVDGLHIDLVRAPDQYPTILDRLPAYKVLSLGVVNGRNVWRCDL 303          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 62/186 (33.33%), Postives = 91/186 (48.92%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE     +F     + + E  EA  LG +  PVL+GPV+YL L K  KG    F              +V++EL      W+Q DEP L ++L +  L AF  AY  L+       +L+ TYF  +  +   T+++L  V     DLV G   + L+ S  PA   L  GV++GRN+W  DL+
Sbjct:  125 YMVPEFVQGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPVTYLWLGK-VKG--DPFDRLNLLQDILPVYRQVLAELAKRDIEWVQIDEPALALELPAEWLAAFKPAYDALQGQTK---LLLTTYFDSI-GQNLDTISALP-VQGLHVDLVHGKDAITLLNSKVPADWLLSVGVINGRNVWRADLS 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_ECOLU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 62/185 (33.51%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE     +F     + + E  EA+ LG +  PVL+GPV+YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L    L A+  AY  L+     + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+   L AG+++GRN+W  DL
Sbjct:  125 YMVPEFVKGQQFKLTWTQLLEEVDEAQALGHKVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQ---VKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CAMJE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni GN=metE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 61/191 (31.94%), Postives = 94/191 (49.21%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLL----SKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKS-GFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE       +    K   EY EAK LG+E+ PVLIG  +   L     +  + +AK                E+  +L     +W++ DEP LV DL    +  F E Y EL +    L +L+++YF D+  + +  L   K   A G D + G ++L L++  GF   K LF G+++G+NI+AND A
Sbjct:  122 YLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIGIFTLFKLIAFKDEKTQKLAKE--------KLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDIALFEEFYQELLNHKKDLKILLQSYFGDL-RDIYPKLLESK-FDALGLDFIEGKQSLALVQQYGFAKDKILFGGLINGKNIYANDYA 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18
Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE     +F  +  + + E  EA  LG +  PVL+GP++YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L +  L A+  AY  L+     + +L+ TYF D      +T+ SL  V     DLV G   +  +    P    L  GV++GRN+W  DL
Sbjct:  125 YIVPEFQQGQEFKLSWTQLLEEVDEALSLGHQVKPVLLGPITYLWLGK-VKG--QVFDRLSLLQDILPVYQQVLAELAKRGIEWVQIDEPALVLELPAEWLTAYPIAYQALQGQ---VKLLLTTYF-DSIGHNLETIKSLP-VQGLHVDLVAGQDDIAQLHESLPKEWVLSLGVINGRNVWRADL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18
Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE     +F     + + E  EA  LG +  PVL+GPV+YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L    L AF  AY  L+     + +L+ TYF  + ++   T+ +L  V     DLV G   +  + +  PA   L AG+++GRN+W  DL
Sbjct:  125 YMVPEFVKGQQFKLTWTQLLDEVDEALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPPAWLEAFKPAYDALQGQ---VKLLLTTYFEGI-SDNLATIAALP-VQGLHVDLVHGKDDVAELHNRLPADWLLSAGLINGRNVWRADL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.803e-18
Identity = 63/185 (34.05%), Postives = 89/185 (48.11%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE     +F     + + E  EA  LG    PVL+GPV+YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L    L AF  AY   ++      +L+ TYF  V      T+T+L  V     DLV G   +  +    P+   L AG+V+GRN+W  DL
Sbjct:  125 YMVPEFVKGQQFKLTWTQLLDEVDEALALGHNIKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQEWLDAFKPAY---DALTGQTKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDEVAELNKRLPSDWLLSAGLVNGRNVWRADL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_ECOUT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.803e-18
Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE     +F     + + E  EA  LG +  PVL+GP++YL L K  KG  + F              +V++EL   G  W+Q DEP LV++L    L+A+  AY  L+     + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+   L AG+++GRN+W  DL
Sbjct:  125 YMVPEFVKGQQFKLTWTQLLEEVDEALALGHKVKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLNAYKPAYDALQGQ---VKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADL 301          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_VIBPA4.575e-1832.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP54.575e-1833.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE44.575e-1833.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT94.575e-1833.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLU4.575e-1833.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJE4.575e-1831.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL5.975e-1833.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP35.975e-1833.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT387.803e-1834.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOUT7.803e-1832.975-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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