CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.569e-26
Identity = 71/185 (38.38%), Postives = 102/185 (55.14%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D  F+   +K + E++EA  LG+ T PVL+GPVS+LLLSK   G  +                +++ +L+ +GA W+Q DEP LV+DLD+    AF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+ L AG+V+GRNIW  DL
Sbjct:  124 YLVPELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYAILNQG-PRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGRVLSAGLVNGRNIWRTDL 301
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.569e-26
Identity = 71/185 (38.38%), Postives = 102/185 (55.14%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D  F+   +K + E++EA  LG+ T PVL+GPVS+LLLSK   G  +                +++ +L+ +GA W+Q DEP LV+DLD+    AF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+ L AG+V+GRNIW  DL
Sbjct:  124 YLVPELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYAILNQG-PRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGRVLSAGLVNGRNIWRTDL 301
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_XYLFA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa GN=metE PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.049e-26
Identity = 71/185 (38.38%), Postives = 102/185 (55.14%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D  F+   +K + E++EA  LG+ T PVL+GPVS+LLLSK   G  +                +++ +L+A+GA W+Q DEP LV+DLD+    AF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+ L AG+V+GRNIW   L
Sbjct:  124 YLVPELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQASGAEWVQIDEPTLVLDLDAQTQQAFRKAYAALNQG-PRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGRVLSAGLVNGRNIWRTAL 301
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.785e-26
Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D  F+   +K + E++EA  LG+ T PVL+GPVS+LLLSK   G  +                +++ +L+ +GA W+Q DEP LV+DLD+    AF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+ L AG+V+GRNIW   L
Sbjct:  124 YLVPELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYATLNQG-PRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGRVLSAGLVNGRNIWRTAL 301
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_LACLA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. lactis GN=metE PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.265e-25
Identity = 66/185 (35.68%), Postives = 97/185 (52.43%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWAND 553
            ++VPE+  D        K + EYKEAK  G ET P +IGP ++L+L+    G  K                 ++ EL   G  W+Q +EP LV+D    +   F   Y EL  + + LN+L++TYF DV  ++++ +  L      G D + G  +L LI K GFP  K LFAG+V+G+NIW N+
Sbjct:  124 YLVPEINKDTIIKANFSKLLNEYKEAKSAGFETRPTIIGPYTFLVLADYKSGATKD----TVLSDVIVAFQTLLKELNQLGVEWLQIEEPALVLDQTEEEKKLFVSIYEELLKSKNNLNILLQTYFGDV-RDSYKEIIKL-DFDGIGLDFIEGRDSLALIQKYGFPKKKILFAGLVNGKNIWRNN 302
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.591e-25
Identity = 71/188 (37.77%), Postives = 104/188 (55.32%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL  D +     ++A+  Y+EAK  LG+E  PVL+GP++YL L K +   AK+F              E++ EL+AAGA W+Q DEP L    D  ++  F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGVVDGRN+W +DL
Sbjct:  122 YIVPELA-DAEPKVLDNRALYYYEEAKKELGIEGKPVLVGPITYLKLGKGSD--AKSFEVLLDKFIPAYV--EILKELEAAGAKWVQIDEPYLATSFDKKEIALFEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSIKALKAHGFPEDKYLAAGVVDGRNVWRSDL 301
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.591e-25
Identity = 71/188 (37.77%), Postives = 104/188 (55.32%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL  D +     ++A+  Y+EAK  LG+E  PVL+GP++YL L K +   AK+F              E++ EL+AAGA W+Q DEP L    D  ++  F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGVVDGRN+W +DL
Sbjct:  122 YIVPELA-DAEPKVLDNRALYYYEEAKKELGIEGKPVLVGPITYLKLGKGSD--AKSFEVLLDKFIPAYV--EILKELEAAGAKWVQIDEPYLATSFDKKEIALFEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSIKALKAHGFPEDKYLAAGVVDGRNVWRSDL 301
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25
Identity = 75/187 (40.11%), Postives = 92/187 (49.20%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP--AGKYLFAGVVDGRNIWANDL 556
            ++VPE+GP   F+    K + E KEA G G+   PV+IGP+++LLLSK   G                   E++S L   GA W+QFDEP LV DL           Y  L S  +   + V TYF D P  A   L     V A G DLV G  T     +G P  AGK L AGVVDGRN+W  DL
Sbjct:  126 YLVPEIGPSTTFTLHPGKVLAELKEALGQGIPARPVIIGPITFLLLSKAVDGAGAPI---ERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT---SVAGVPELAGKTLVAGVVDGRNVWRTDL 304
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25
Identity = 75/187 (40.11%), Postives = 92/187 (49.20%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP--AGKYLFAGVVDGRNIWANDL 556
            ++VPE+GP   F+    K + E KEA G G+   PV+IGP+++LLLSK   G                   E++S L   GA W+QFDEP LV DL           Y  L S  +   + V TYF D P  A   L     V A G DLV G  T     +G P  AGK L AGVVDGRN+W  DL
Sbjct:  126 YLVPEIGPSTTFTLHPGKVLAELKEALGQGIPARPVIIGPITFLLLSKAVDGAGAPI---ERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT---SVAGVPELAGKTLVAGVVDGRNVWRTDL 304
[Close]
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25
Identity = 75/187 (40.11%), Postives = 92/187 (49.20%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP--AGKYLFAGVVDGRNIWANDL 556
            ++VPE+GP   F+    K + E KEA G G+   PV+IGP+++LLLSK   G                   E++S L   GA W+QFDEP LV DL           Y  L S  +   + V TYF D P  A   L     V A G DLV G  T     +G P  AGK L AGVVDGRN+W  DL
Sbjct:  126 YLVPEIGPSTTFTLHPGKVLAELKEALGQGIPARPVIIGPITFLLLSKAVDGAGAPI---ERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT---SVAGVPELAGKTLVAGVVDGRNVWRTDL 304
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_XYLFT1.569e-2638.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF21.569e-2638.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFA2.049e-2638.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM7.785e-2637.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLA2.265e-2535.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMF6.591e-2537.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMC6.591e-2537.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU8.608e-2540.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA8.608e-2540.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP8.608e-2540.115-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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