CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14
Identity = 57/187 (30.48%), Postives = 91/187 (48.66%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   +V+     +  +  +K A+ + V   PV++GP++++ LSK   G  ++F              EV+  L  AGA +IQ DEP+LV D          +AY    +   G  ++++TYF  V  +   +L     V   G DLV   G    ++    F   K L+AG++DGRN+WA D+
Sbjct:  120 YIVPEWD-NVEPKVEKNTLLERFKYAQSINVNAHPVIVGPITFVKLSK---GGHQSFEEKVETLLPLYK--EVLQSLVDAGAEYIQIDEPILVTDDSESYEDITRKAYDYFANEGLGKYLVIQTYFERVHLKFLSSLP----VGGLGLDLVHDNGYNLKQIEDGDFDQSKALYAGIIDGRNVWAADI 296          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STAHJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14
Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFS-EAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK-TLELIKSG-FPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   +V+     +  +  +  AK L V   PV++GP++++ LSK   G  ++F              EV+  L  AGA +IQ DEP+LV D +S    A + EAY   +       ++++TYF     +   +L     V   G D V      L+ I+SG F + K L+AG++DGRN+WA D+
Sbjct:  120 YIVPEWD-NVEPKVNHNVLLDRFNYAKSLNVNAHPVIVGPITFVKLSK---GGHQSFEEKVQTLLPLYK--EVLQALVDAGAEYIQVDEPVLVTD-ESEAYEAITREAYDYFDKAGLADKLVIQTYFERANVKFLSSLP----VGGLGLDFVHDNGYNLKQIESGDFDSSKTLYAGIIDGRNVWAADI 296          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_AQUAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aquifex aeolicus GN=metE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14
Identity = 60/199 (30.15%), Postives = 94/199 (47.24%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXX-------------EVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIK-SGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  +  F    ++ + +YK  K  G+ TVP +IG  ++L LSK  K V +                             E++  LK  G + + F+EP LV DL+ +     +E Y+EL     G+++ + TY+  V    +    +L  V A  FDLV   + L+ IK  GFP  K L AG+++GR  W  +L
Sbjct:  113 YLVPELEGE-NFKLLINRPLEDYKFFKEKGINTVPHVIGLFTFLKLSKAPKRVEEEGLPVIILEKLDTKERLEKFTKALLPVYKELLESLKNEGVNRVHFEEPALVTDLEDYDWEILNEIYSELSKV--GVDLGILTYYDSV--SDYDKFVNLP-VKALHFDLVSNEENLKNIKEKGFPEDKELIAGIINGRQPWRANL 305          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_HERA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=metE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 58/188 (30.85%), Postives = 97/188 (51.60%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIK-SGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE+ P+ ++   ++  + + + A+ + G +  PVL+GP ++L L++ A                     +++ EL     ++IQ DEP LV D+   +  AF+  Y EL        ++V+TY+ DV    ++ L  L  +   G DLV+G      I+  GFP  K L AGVV+GRN+W +DLA
Sbjct:  119 YLVPEI-PE-RWELQANLVLEQVRFAQNVVGAKARPVLLGPWTFLRLARLAGA-----ELAQHLQQLTAMYAQIVRELNDCNVAFIQCDEPALVGDVTEEEWQAFAACYRELSKHGK---IVVQTYYGDV-TPWYRELCRLP-IHGLGLDLVQGHANWAAIQYHGFPQDKILVAGVVNGRNVWRSDLA 294          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13
Identity = 55/188 (29.26%), Postives = 84/188 (44.68%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYG--FDLVR-GTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   +  F     + + E  EA  L     PVL+GP++YL + K  +   K F              E+ + L      WIQ DEP LV++L    L A+  AY +L  T   + +L+ TYF  +    +  L  +K +   G   DL       + L+    P    L AG+++G+NIW  +L
Sbjct:  126 YIVPEFVQNQIFKLNCTQLLAEIDEALSLNHPIKPVLLGPLTYLWIGKTKE--TKEFDRLSLLPSLLLVYKEIFNILSKKNIQWIQIDEPALVLELPQTWLKAYLHAYDQLYQT--KIKLLLTTYFGKI----YHQLPIIKQLKVNGLHIDLTNCSDNDISLLHEQLPKKWILSAGIINGKNIWKTNL 305          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRA5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype V GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   + K    ++  +  Y EA+ + G +  PV+ GP++Y+ LS        T               +V  +L  AGA++IQ DEP+ V D     +      Y      +   + + +TYF    A     L+ L  VT +G D + G  + L  +K G    K LFAG+V+GRNIWA +L
Sbjct:  118 YIVPEWEVETKPHLQNNYLLDLYLEAREVVGDKAKPVITGPITYVSLSSGIVDFEATVQRLLPLYK------QVFQDLIDAGATYIQIDEPIFVTDEGELLVDIAKSVYDFFAREVPQAHFIFQTYFES--AVCLDKLSKLP-VTGFGLDFIHGRAENLAAVKQGLFREKELFAGIVNGRNIWAVNL 295          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype III GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   + K    ++  +  Y EA+ + G +  PV+ GP++Y+ LS        T               +V  +L  AGA++IQ DEP+ V D     +      Y      +   + + +TYF    A     L+ L  VT +G D + G  + L  +K G    K LFAG+V+GRNIWA +L
Sbjct:  118 YIVPEWEVETKPHLQNNYLLDLYLEAREVVGDKAKPVITGPITYVSLSSGIVDFEATVQRLLPLYK------QVFQDLIDAGATYIQIDEPIFVTDEGELLVDIAKSVYDFFAREVPQAHFIFQTYFES--AVCLDKLSKLP-VTGFGLDFIHGRAENLAAVKQGLFREKELFAGIVNGRNIWAVNL 295          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype Ia GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGL-GVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   + K    ++  +  Y EA+ + G +  PV+ GP++Y+ LS        T               +V  +L  AGA++IQ DEP+ V D     +      Y      +   + + +TYF    A     L+ L  VT +G D + G  + L  +K G    K LFAG+V+GRNIWA +L
Sbjct:  118 YIVPEWEVETKPHLQNNYLLDLYLEAREVVGDKAKPVITGPITYVSLSSGIVDFEATVQRLLPLYK------QVFQDLIDAGATYIQIDEPIFVTDEGELLVDIAKSVYDFFAREVPQAHFIFQTYFES--AVCLDKLSKLP-VTGFGLDFIHGRAENLAAVKQGLFREKELFAGIVNGRNIWAVNL 295          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 60/186 (32.26%), Postives = 84/186 (45.16%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISEL-KAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D +F   +   + + +  +  GV   PVL+GP+++L L++   G                   EV   L K+    W+Q DEP LV D+    L      Y  L        V V TYF     +A  TL  + G+ A G DLV    T EL  + +   + L AG+VDGRNIW  DL
Sbjct:  127 YLVPELSADTRFVLDASALIEDLRCQQVRGVNARPVLVGPLTFLSLARTTDG--------SNPLDHLPALFEVYERLIKSFDTEWVQIDEPALVTDVAPEVLEQVRAGYTTLAKR---DGVFVNTYFGS-GDQALNTLAGI-GLGAIGVDLVTHGVT-EL--AAWKGEELLVAGIVDGRNIWRTDL 296          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 60/186 (32.26%), Postives = 84/186 (45.16%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISEL-KAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D +F   +   + + +  +  GV   PVL+GP+++L L++   G                   EV   L K+    W+Q DEP LV D+    L      Y  L        V V TYF     +A  TL  + G+ A G DLV    T EL  + +   + L AG+VDGRNIW  DL
Sbjct:  127 YLVPELSADTRFVLDASALIEDLRCQQVRGVNARPVLVGPLTFLSLARTTDG--------SNPLDHLPALFEVYERLIKSFDTEWVQIDEPALVTDVAPEVLEQVRAGYTTLAKR---GGVFVNTYFGS-GDQALNTLAGI-GLGAIGVDLVTHGVT-EL--AAWKGEELLVAGIVDGRNIWRTDL 296          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_STAEQ2.350e-1430.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAHJ8.928e-1432.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AQUAE8.928e-1430.155-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HERA21.166e-1330.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL3.393e-1329.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA54.431e-1330.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA34.431e-1330.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA14.431e-1330.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL4.431e-1332.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB4.431e-1332.265-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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