CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23
Identity = 68/188 (36.17%), Postives = 101/188 (53.72%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL  +       ++A+  Y+EAK  LG+E  PVL+GPV+YL L K +   A++F              E++ EL+ AGA+W+Q DEP L    D  ++  F + Y      +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGV+DGRN+W +DL
Sbjct:  122 YIVPELA-EADPKVLDNRALYYYEEAKNELGIEGKPVLVGPVTYLKLGKGSD--AESFEILLDKFIPAYI--EILKELETAGATWVQIDEPYLATSFDKKEIALFEKVYKAFHDAVPNLKIELQTYFESL--DYYEEVVNLP-VAAVGIDFVHDHGDSIKALKAHGFPQNKYLAAGVIDGRNVWRSDL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.723e-23
Identity = 68/185 (36.76%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++ PEL P   F+  S K V E+ EAK LGV T PVL+GPV++L   K AK  A+ F              +V+  L AAGA W+Q DEP L +DL   +      AY  L     G+ +++ +YF     E   T  +L  V     DLVR    LE   +       L  GV+DGRN+W  DL
Sbjct:  140 YLAPELSPGQAFALTSSKPVDEFLEAKALGVHTRPVLLGPVTFL---KLAKTKAEGFSPLSLLSALLPVYGQVLRGLAAAGADWVQIDEPCLALDLTDFERAELRRAYGALTHAAPGVRLMLTSYFGGY-GENLATAVNLP-VEGLHLDLVRAPDELEAALAASRESLVLSLGVIDGRNVWRADL 319          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_FLAJ1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=metE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23
Identity = 69/186 (37.10%), Postives = 100/186 (53.76%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL-ELIKSGFPAGKY-LFAGVVDGRNIWAND 553
            +IVPE   + KF   S K + E+KEA  +G++T PVLIGPVSYLLL K  +   + F              E++ +L+   A +IQ DEP L ++L   + + F++ Y E+      L +++  YF D   E  +T  +L  V  +  DLVR    L ++++SG  A    L  GVVDGRNIW ND
Sbjct:  124 YIVPEFTKNQKFELFSEKILNEFKEANAVGIKTKPVLIGPVSYLLLGKEKE---EGFNRIDLIDALLPVYFEILEKLQIENAEYIQLDEPFLALNLTDKERNVFTKVYNEINVRFPKLKIVLANYF-DCFGENLETALALP-VDTFHLDLVRCQLQLDDILESGKLASNVNLSLGVVDGRNIWKND 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23
Identity = 70/185 (37.84%), Postives = 94/185 (50.81%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPELGP   F         E  EA  L +   PVLIGP++YL LS   K     F               ++ +L+ +G  W+Q DEP L +DL +  L AFS AY  L +  SG+ VL+ TYF +  AE    + +L  V     DLVR  + L+  ++  PA   L AGV+DGRNIW  DL
Sbjct:  120 YLVPELGPQTSFDGGVEWLFEEIDEALALNLPVKPVLIGPITYLWLS---KSHVAGFDRLSLLPKLVIRYARLLDKLRQSGIEWVQLDEPALCVDLPAEWLDAFSAAYEVLGT--SGVKVLLATYF-ESAAEHAPRVAALP-VAGVHLDLVRAPQQLDAWRAALPAHAVLSAGVIDGRNIWRADL 297          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_THIDA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.344e-22
Identity = 65/185 (35.14%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE      F   + + + +  EA+  GV   PV+IGPV+YL L K   G  K                E++  L  AGA W+Q DEPLLV +L++   HAF+ AY  L++  S + +L+ TYF  +    +  L +   V     D + G   +E +    PA K L  GVV+GRNIW  DL
Sbjct:  131 YIVPEFAASTSFKLDASRLLAQLAEAQAAGVRAKPVIIGPVTYLALGKAKDGSDKL----GLLDRLLPVYVELLEALAGAGAEWVQIDEPLLVTELNAEWQHAFNRAYHALKA--SRVKLLLATYFGQLLENRY--LAATLPVAGLHVDAISGRDDVEPLLGLLPAHKVLSLGVVNGRNIWKTDL 307          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.344e-22
Identity = 70/185 (37.84%), Postives = 91/185 (49.19%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  +  F         E  EA  LG+   PVLIGPV+YL LSK        F               ++ +LKA G  W+Q DEP L +DL+   L AF  AYA L    +G  +L+ TYF D  A+  Q   +L  V  +  DLVR  + L   ++  PA   L  GV+DGRNIW  DL
Sbjct:  120 YLVPELDAETTFDGGPAWFFEEADEALALGLRARPVLIGPVTYLWLSKSH---VAGFDRLALLPQLLQGYRRILDQLKARGIEWVQIDEPALCLDLEPAWLDAFDTAYAALRE--AGPKLLLATYF-DTAADHAQRAAALP-VDGFHIDLVRAPEQLAAWQAALPAHAVLSLGVIDGRNIWRTDL 297          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.344e-22
Identity = 70/185 (37.84%), Postives = 91/185 (49.19%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  +  F         E  EA  LG+   PVLIGPV+YL LSK        F               ++ +LKA G  W+Q DEP L +DL+   L AF  AYA L    +G  +L+ TYF D  A+  Q   +L  V  +  DLVR  + L   ++  PA   L  GV+DGRNIW  DL
Sbjct:  120 YLVPELDAETTFDGGPAWFFEEADEALALGLRARPVLIGPVTYLWLSKSH---VAGFDRLALLPQLLQGYRRILDQLKARGIEWVQIDEPALCLDLEPAWLDAFDTAYAALRE--AGPKLLLATYF-DTAADHAQRAAALP-VDGFHIDLVRAPEQLAAWQAALPAHAVLSLGVIDGRNIWRTDL 297          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.344e-22
Identity = 65/188 (34.57%), Postives = 101/188 (53.72%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL  D      +++A+  Y+EAK  LG+E  PVL+GP++YL L K +   A++F              E++ EL+ AG  W+Q DEP L    +  ++  F + Y   +  +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGV+DGRN+W ++L
Sbjct:  122 YIVPELA-DANPKLLNNRALYYYEEAKKELGIEGKPVLVGPITYLKLGKGSN--AESFEVLLDKFIPAYI--EILEELETAGVEWVQIDEPYLATSFEKKEIALFEKVYQSFQEAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSLQALKTYGFPQDKYLAAGVIDGRNVWRSNL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22
Identity = 71/186 (38.17%), Postives = 94/186 (50.54%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL-ELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   D  FS +S K + EY+EAK  GV+T PV+IGPVS+LLL K     A                 EV+ EL  AG   +Q DEP LV+DL   +  A  +AY  L +  + + + V TYF  +  +   T   L  +     DL RG + L E +  G P    L  GV+DGRN+W  DL
Sbjct:  129 YIVPEFSHDTTFSLSSTKVIDEYEEAKAQGVDTRPVVIGPVSFLLLGKTQ---ADDLDALDLLDDLLPVYAEVLQELADAGCEAVQLDEPNLVLDLSDAERAALDQAYEAL-ADAADIELHVATYFGGL-EDNLPTALDLP-IDVLHLDLTRGEEQLDEALDHGVPDDLALSLGVIDGRNVWRADL 308          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BACSU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus subtilis GN=metE PE=1 SV=4)

HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22
Identity = 70/193 (36.27%), Postives = 101/193 (52.33%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSK-----PAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGT-KTLELIKS-GFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE    ++F    +K + +Y+  K   GVET PV++GP +++ L+K      AK + K                +++ EL+  G  W+Q DEP LV    S  +    E +  + S LS LNVL++TYF  V  +A++ L S   V   G D V    + LE +K+ GFP  K L AGV+DGRNIW  DL
Sbjct:  120 YIVPEYDESIEFRLTRNKQLEDYRRIKQEYGVETKPVIVGPYTFVTLAKGYEPSEAKAIQKRLVPLYV---------QLLKELEEEGVKWVQIDEPALVT-ASSEDVRGAKELFESITSELSSLNVLLQTYFDSV--DAYEELISYP-VQGIGLDFVHDKGRNLEQLKTHGFPTDKVLAAGVIDGRNIWKADL 299          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_LISIN2.120e-2336.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR4.723e-2336.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_FLAJ16.169e-2337.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURXL6.169e-2337.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THIDA2.344e-2235.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU2.344e-2237.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH2.344e-2237.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW62.344e-2234.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD3.061e-2238.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACSU3.061e-2236.275-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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