CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.984e-21
Identity = 69/185 (37.30%), Postives = 91/185 (49.19%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F  +  +   E  EA  LG +  PVLIGP++YL L K AKG   +F              E++  L A G  W+QFDEP+L +DL      AF  AY  L+   S L  LV TYF  +  E    L +   V     DLVR  + L  +    P+ K L  GVV+GRN+W  DL
Sbjct:  132 YLVPEFTQDQRFQLSWEQLFEEVDEAHALGHKVKPVLIGPLTYLWLGK-AKG--DSFDRLELLDRLLPVYGEILGRLAAQGVEWVQFDEPVLTLDLPQDWKTAFERAYHSLQ--YSPLKKLVATYFGGL--EDNLGLAATLPVDGLHIDLVRAPEQLPAVLDRLPSYKVLSLGVVNGRNVWRCDL 309          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.984e-21
Identity = 69/185 (37.30%), Postives = 89/185 (48.11%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE  P   F  AS     +  EA+ L     PVL+GP+S+L L K +KG   TF              +V+  LK  G  W+Q DEP+LV+DL      AF  AY+ L +   G   L+ TYF  +       L     V     DLV   + L  +   FP+ K L AG+VDGRNIW NDL
Sbjct:  124 YIVPEFQPQQAFRLASSTLFNQVAEAQALDFPIKPVLLGPLSFLWLGK-SKG--STFDKLSLLDALLPVYGQVLHRLKTQGVEWVQIDEPILVLDLPPDWKAAFERAYSSLVN--GGPKRLLATYFGALGDNT--RLACQLPVEGLHIDLVSAPEQLAKVLDEFPSYKILSAGLVDGRNIWRNDL 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.984e-21
Identity = 71/177 (40.11%), Postives = 92/177 (51.98%), Query Frame = 2
Query:   44 ASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNV---LVETYFADV--PAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            A  K V E+ EAK LGV+T PV++GPVSYL L K  K  +                 E++ +LK AGA  +Q DEP+LV+DL       F EAY      L G +V   ++ TYF DV    +A + L     V  + FD VR  + L+ + S    G+ L AGVVDGRNIW  D A
Sbjct:  146 AGIKPVDEFNEAKALGVQTRPVILGPVSYLYLGKADKD-SLDLEPISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEAVQSKFKEAY----DALVGADVPELILTTYFGDVRPNLKAIENLP----VAGFHFDFVRVPEQLDEVASILKDGQTLSAGVVDGRNIWKTDFA 313          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.592e-21
Identity = 71/188 (37.77%), Postives = 93/188 (49.47%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVA---KTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F  +  +   E +EAK LG    PVLIGP+SYL L K  KG A   +TF              EV+  L A G  W+Q DEP+L +DL     +AF  AY  L+   + L  LV TYF  +  E    L +   V     DLVR  +   +I    PA K L  G+V+GRN+W  DL
Sbjct:  125 YLVPEFSVDQQFQLSWTQLFEEVEEAKALGHAIKPVLIGPLSYLWLGK-LKGEADQTQTFDKLELLDRLLPVYGEVLDRLAAQGVEWVQIDEPILALDLPQDWKNAFERAYNLLQR--APLKKLVATYFGGL--EDNLGLAATLPVDGLHIDLVRAPEQYPVILDRLPAYKVLSLGLVNGRNVWRCDL 307          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.385e-21
Identity = 62/185 (33.51%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  +  F   + K +TE ++A+ L  +  PV++GP+SYL L+K   G   +               E++  L      W+QFDEP+L +DL     HAF   Y +L+  L  L+VL+ TYF   P +    L +     A   D+ RG   L  +       K L  GV+DGRNIW  DL
Sbjct:  129 YLVPELNANTHFKLNASKLLTELEQARALTSKVKPVILGPLSYLWLAKITDG---STHKLGFLDDLITVYRELLGTLAKEAVEWVQFDEPILALDLPEQWQHAFERVYHQLQ--LPNLSVLLATYFG--PLDTNLRLAARLPTAALHLDITRGGDDLPRVLDILSPHKILSVGVIDGRNIWKADL 306          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.385e-21
Identity = 69/189 (36.51%), Postives = 89/189 (47.09%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE--LIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPE   D KFS  S KA+ EY EAK  +G    PVL+GPVSYLL  K  +     F              ++++ L+  GA WIQ DEP LVMDL   +   +   Y  L +    L  +V TYF          + +   V A   DLVR    L   L  +   +   L  GVVDGRN+W ND +
Sbjct:  126 YIVPEFRKDQKFSPISEKAIREYTEAKVVIGKAAKPVLLGPVSYLLAGKEKEA---GFNRIELIENLLPVYTKLLATLQQNGAEWIQLDEPFLVMDLTVQERKTYETTYTALRNLFPSLKFIVATYFECTGTNI--DIAAKLPVDALHLDLVRCPSQLSDILTPAFISSNTMLSLGVVDGRNVWKNDFS 309          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_LACPL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactobacillus plantarum GN=metE PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.848e-21
Identity = 63/188 (33.51%), Postives = 93/188 (49.47%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKG-LGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   DV F    ++ +  Y+EAK  LG++  PV++GP+S+L L K                       +V  EL  AGA WIQ DEP LV      +L  +  A   L + +  L + ++TYF  +  + +  + +   + A G DLV   G     L+  GFP  K L AG++DG N+WA+DL
Sbjct:  121 YIVPEFD-DVSFKLLDNRWLRYYQEAKQELGIDGKPVILGPISFLKLGKRHGQYLDDAAVNELLPQLLPLYQQVFEELATAGAKWIQLDEPTLVKTTTVAELAPYQTALEHLHAAVPSLKIELQTYFDSL--DQYDKIVTWP-IQALGLDLVHDHGENLAHLVDHGFPTDKILAAGIIDGHNVWASDL 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_SHEON (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shewanella oneidensis GN=metE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.286e-20
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL  D  FS A  +   E  EA+ LG +  PVL+GPVSYL L   AK V + F              E+++   A G +W+Q +EP+L ++L      A SE+Y  L++  + + +L+ +Y+  +     Q L S   V     DLV   + L L  +     + L  GVV+GRN+WA ++
Sbjct:  122 YLVPELKQDQVFSIAYEQFFDEVAEAQALGYKAKPVLLGPVSYLYL---AKTVGQDFDKLSLLPNLLKAYAEILARFAAQGVTWVQLEEPILALELTHEWQAAISESYQALKT--AQVKILLTSYYGSI--SHHQALVSALPVAGLHLDLVTAPEQLALFANALRPDQILSVGVVNGRNVWAAEV 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.286e-20
Identity = 68/185 (36.76%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPEL PD++F   +     E +EA+  G      L+GPV++L L+K   G+A                  V+  L A G  W+Q DEP LV+DL      A+  AYA L +   G  +L+ TYF    A     L     V     DLVR  + LE   + +PA K L AGVVDGRNIW  DL
Sbjct:  120 YLVPELTPDLRFGPGTGWLFDEVREAQAAGHRVKVALLGPVTFLHLAKARGGLADKL---SLLPQLLPAYAAVLKRLAAEGVEWVQIDEPALVLDLPQAWSDAYGPAYATL-AAAGGPRLLLATYFE--AASHHAALIRSLPVAGVHLDLVRAPQQLEAF-APWPADKVLSAGVVDGRNIWRTDL 297          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.286e-20
Identity = 66/185 (35.68%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE G D +F     +   E +EA+ LG    PVLIGP++YL L K AKG    F              ++   L A G  W+Q DEP+LV+DL     +AF  AY +++     L  L+ TYF  +  E    L +   V     DLVR  +    I    PA K L  G+V+GRN+W  DL
Sbjct:  125 YLVPEFGADQQFQLGWEQLFEEVEEARALGHAVKPVLIGPLTYLWLGK-AKGA--EFDKLELLDRLLPLYGQIFQRLAAQGVEWVQIDEPILVLDLPQDWKNAFERAYNQIQR--EPLKKLLATYFGGL--EENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKVLSLGLVNGRNVWRCDL 302          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_PSESM1.984e-2137.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC1.984e-2137.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL1.984e-2140.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU52.592e-2137.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD23.385e-2133.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH33.385e-2136.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACPL9.848e-2133.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHEON1.286e-2032.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO1.286e-2036.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEF51.286e-2035.685-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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