CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 1.680e-20
Identity = 63/186 (33.87%), Postives = 92/186 (49.46%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKG--VTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            ++ P      +F     K V E+ EAK LG+ T PVL+GPVSYL L K  K  +                 E++S+L +AGA+ +Q DEP+LV+DL ++   A  +AY       +   + + TYF  V       L ++KG  V A   D VR  +  + + +     + L  G+VDGRNIW ND
Sbjct:  129 YVRPTFSKTTQFKLNGQKPVDEFLEAKELGIHTRPVLLGPVSYLFLGKADKD-SLDLEPLSLLEQLLPLYTEILSKLASAGATEVQIDEPVLVLDLPANAQAAIKKAYTYFGEQSNLPKITLATYFGTV----VPNLDAIKGLPVAALHVDFVRAPEQFDEVVAAIGNKQTLSVGIVDGRNIWKND 309          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_AERS4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aeromonas salmonicida (strain A449) GN=metE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.680e-20
Identity = 66/186 (35.48%), Postives = 90/186 (48.39%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE   D +F     +   E +EAK LG+    VL+GPVSYL L K  +     F              E++++L A G  W+Q DEP L +DL      A+  AY  L        +L+ TYF  V A     +TSLK V     DLV   + LE +    PA   L AGV++GRN+W  +LA
Sbjct:  122 YLVPEFSRDQRFKLGWSQLFDEVEEAKALGLPVKAVLLGPVSYLWLGKEKE---SGFSRLELLDRLLIVYQEILAKLAAQGVEWVQIDEPALALDLPDEWRLAYLNAYERLSGP---CKLLLTTYFGSV-AHQRDIITSLK-VDGLHLDLVAAPEQLETLVPHLPAQWVLSAGVINGRNVWRANLA 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BIFAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.384e-20
Identity = 62/189 (32.80%), Postives = 94/189 (49.74%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSG-LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG--TKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE+         S K   E+ EAK LG+ T PVLIGP ++L L++  +     +              EV+++    G  WIQ DEP LV+D +   +  F   YA++     G + VL+ TYF  + A+ ++T+ +L G    G DL  G       + K G      +FAGV++GRNIW N+ A
Sbjct:  125 YLVPEIDSATDIKLNSTKPFDEFNEAKALGITTKPVLIGPYTFLKLARNPQAEELDY-DKGLVNAVAAVYAEVVAKFAELGVQWIQIDEPYLVLDKEPGDVELFKSLYAKILPAREGKVKVLLNTYFGHI-ADVYETV-NLLGFDGIGLDLNEGKDENLAAVEKYGVAEKTTIFAGVINGRNIWRNNYA 310          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.337e-20
Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL  D  F     + +T+  EA+  G+   PV+IGPV+YL L K +    +                +++  L  AGA W+Q DEP LV DLD++  +AF+ AY +L++    L  L+ TYF ++  +  Q    L  V     D +     +  +    P+ K L  GVV+GRNIW +DL
Sbjct:  124 YIVPELTADTHFELNPERLLTQLSEARKQGLNAKPVIIGPVTYLWLGKTSDASNR----LDLLERLLPVYSQLLEALADAGAEWVQLDEPALVTDLDANWRYAFNLAYHQLKANRPKL--LLATYFGEL-RDNLQLACELP-VAGLHIDAISAPAEVSRVADWLPSHKVLSLGVVNGRNIWKSDL 300          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19
Identity = 66/185 (35.68%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F  +  +   E  EA+ LG +  PVLIGP++YL L K AKG    F              +++  L   G  W+Q DEP+LV+DL     +AF  AY  L+S    L  LV TYF  +  E    L +   V     DLVR  +    I    PA K +  G+V+GRN+W  DL
Sbjct:  127 YLVPEFSADQQFQLSWEQLFEEVDEARALGHQVKPVLIGPLTYLWLGK-AKGA--EFDRLDLLDRLLPLYGQILRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQS--EPLKKLVATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPSILDRLPAYKVVSLGLVNGRNVWRCDL 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BURTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19
Identity = 63/186 (33.87%), Postives = 87/186 (46.77%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGL-NVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE  P   F         E +EA+ LG      L+GP++ L L K   G+A                  +++ L+ AG  W+Q DEP+  +DL +    A   AY   E+ + G   +LV TYF DV   A   L     V     DLVRG   L+   + +PA K L  G+VDGRN+W NDL
Sbjct:  123 YLVPEYSPATTFGPGVEWLFDEVREARALGHRPKAALVGPLTLLWLGKARDGLADRLELLPRLVPAYRA---LLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAY---EALVPGAPKLLVATYFDDVSEHA--ALLKALPVAGLHVDLVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDL 300          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BACP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19
Identity = 64/188 (34.04%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAK-GLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE     +F    +K +  Y++ K   GVET PV++G  +++ LSK  +                    +++ EL+ AG  W+Q DEP LV       + A  E Y  +   +  LN+L++TYF  V  +A++ L +   V A G D V  +G    ++ K GFP  K L AGV+DGRNIW +DL
Sbjct:  120 YIVPEYEKSTEFKLTHNKPLEAYEKVKKAFGVETKPVVLGLYTFVSLSKGYE----PNEVKEIQQRLIPLYTQLLKELEEAGVKWVQIDEPALVT-ASYEDVKAVKEIYQTITEAVPALNILLQTYFDSV--DAYEELVTYP-VEAIGLDFVHDQGRNLDQVKKHGFPKDKILAAGVIDGRNIWRSDL 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.422e-19
Identity = 66/185 (35.68%), Postives = 91/185 (49.19%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F+ +  +   E  EAK LG    PV+IGP++YL L K AKG    F              E+++ L   G  W+Q DEP+LV+DL     +A+   Y  L+   + L  LV TYF  +  E    L +   V     DLVR  +    I    PA K L  G+V+GRN+WA DL
Sbjct:  130 YLVPEFTVDQQFALSWEQLFEEVDEAKALGHAAKPVVIGPLTYLWLGK-AKG--GDFDKLELLDRLLPVYDEILNRLAGQGVEWVQIDEPILVLDLPQEWKNAYERVYNILQR--APLKKLVATYFGGL--EENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKILSLGLVNGRNVWACDL 307          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.422e-19
Identity = 64/185 (34.59%), Postives = 88/185 (47.57%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F  +  +   E  EA+ LG +  PVLIGP++YL L    KG    F              +++  L   G  W+Q DEP+LV+DL     +AF  AY  L+S    L  LV TYF  +  E    L +   V     DLVR  +    I    PA K +  G+V+GRN+W  DL
Sbjct:  127 YLVPEFSADQQFQLSWEQLFEEVDEARALGHQVKPVLIGPLTYLWL---GKGKGAEFDRLDLLDRLLPLYGQILRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQS--EPLKKLVATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPSILDRLPAYKVVSLGLVNGRNVWRCDL 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19
Identity = 66/185 (35.68%), Postives = 89/185 (48.11%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F  +  +   E  EA+ LG +  PVLIGP++YL L K AKG    F              ++   L   G  W+Q DEP+LV+DL     +AF  AY  L+S    L  LV TYF  +  E    L +   V     DLVR  +    I    PA K +  G+V+GRN+W  DL
Sbjct:  127 YLVPEFSADQQFQLSWEQLFEEVDEARALGHQVKPVLIGPLTYLWLGK-AKGA--EFDRLDLLDRLLPLYGQIFRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQS--EPLKKLVATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPSILDRLPAYKVVSLGLVNGRNVWRCDL 304          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_YEAST1.680e-2033.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AERS41.680e-2035.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFAA6.384e-2032.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV8.337e-2033.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAB1.089e-1935.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURTA1.089e-1933.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACP21.089e-1934.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW1.422e-1935.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA81.422e-1934.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE1.857e-1935.685-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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