CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19
Identity = 59/197 (29.95%), Postives = 99/197 (50.25%), Query Frame = 2
Query:    2 FIVPELGPDVKFS------YASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSK---PAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKL--HAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKT-LELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE     +F       Y+  K + E+ EAK + +ET PV++GP+S+LLL K    +K  +  F              E+  + +  G   +Q DEP+L  DL   +L  +A++ A+  +      +N+L+ TYF ++  E    +TSL  V     D +R + + +E + +  P    +  G++DGRN+W NDL
Sbjct:  151 YIVPEFEDSQQFKLTNYGGYSEPKPIHEFLEAKSIDIETRPVVLGPISFLLLGKSSDSSKPYSSKFDSLVHLNALLGVYEELFKQFEKIGVKSVQIDEPVLCFDLFETELIKNAYTTAFNVIHKAAPNINILIATYFGEI-RENIDLITSLP-VNGIHIDTIRSSSSEVESVLTKIPTSWTISIGIIDGRNVWKNDL 345          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19
Identity = 63/188 (33.51%), Postives = 91/188 (48.40%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYG--FDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPE     +F  AS +   E ++AK LG+    VLIGP++YL L K    V   F              E++ ++ + G  W+Q DEP+L +DL+     +F+EAY  L        +L+ TYF  V       LT LK +   G   D+    + LE   +   +GK L  G +DGRNIW  DL+
Sbjct:  121 YIVPEFDDTTQFRLASDRLFQEIEDAKALGITAKAVLIGPLTYLYLGKE---VTPGFQRLDLLPRLLPVYREILQKIASLGVEWVQIDEPILSLDLEQPWRDSFAEAYHTLHD--GSCRLLLTTYFGTVD----HHLTLLKNLPVDGLHIDVSSAPEQLESFLTEDFSGKTLSLGCIDGRNIWRADLS 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_NEIMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup A GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19
Identity = 64/185 (34.59%), Postives = 93/185 (50.27%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F   +   V + +EA+ LG++  P ++GP+++L + K  KG  + F              E+++ L  AGA WIQ DEP L +DL    + A+ + YA L        +L+ TYF  V AE    L SL  V     DLVR  + L+         K L AGV+DGRNIW  +L
Sbjct:  120 YLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKV--SAKILLSTYFGSV-AEHAALLKSLP-VDGLHIDLVRAPEQLDAFAD---YDKVLSAGVIDGRNIWRANL 295          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_HAEIG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittGG) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19
Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE      F       V + +EAK LG+   PV++GP+++L L K  KG A  F              E+++ L A GA WIQ DEP L +DL +  + A+   YAEL        +L+ TYF  V AE  + L +L  V     DLVR  + L   +      K L AGV++GRNIW  +L
Sbjct:  120 YLVPEFQKSTAFKANPAHYVNQIREAKALGLNFKPVIVGPLTFLWLGKE-KGEA--FNRFDLLNQLVPVYVEILNALVAEGAEWIQIDEPALALDLPAEWVEAYKSVYAELSKV--NAKLLLATYFGSV-AEHAELLKALP-VAGLHLDLVRAPEQLAAFED---YSKVLSAGVIEGRNIWRANL 294          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19
Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE      F       V + +EAK LG+   PV++GP+++L L K  KG A  F              E+++ L A GA WIQ DEP L +DL +  + A+   YAEL        +L+ TYF  V AE  + L +L  V     DLVR  + L   +      K L AGV++GRNIW  +L
Sbjct:  120 YLVPEFQKSTAFKANPAHYVNQIREAKALGLNFKPVIVGPLTFLWLGKE-KGEA--FNRFDLLNQLVPVYVEILNALVAEGAEWIQIDEPALALDLPAEWVEAYKSVYAELSKV--NAKLLLATYFGSV-AEHAELLKALP-VAGLHLDLVRAPEQLAAFED---YSKVLSAGVIEGRNIWRANL 294          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19
Identity = 61/185 (32.97%), Postives = 88/185 (47.57%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   D  FS    + + +  EA   GV   PV++GPV+YL L K AK V+                  ++  L A G  W+Q DEP+LV +LD+    AF  AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA + L  G ++GRNIW  DL
Sbjct:  129 YIVPEFHADTNFSLDPSRLLQQLAEANAQGVNAKPVILGPVTYLWLGK-AKDVSDRLALLPKLLPVYGA---LLDTLTAQGVEWVQIDEPILVTELDAEWRQAFRTAYAALET--RRIKLLLATYFGQLQDNL--TLAASLPVDGLHIDAINARDEVDALVRELPAERVLSVGAINGRNIWKTDL 305          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BURCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19
Identity = 61/185 (32.97%), Postives = 88/185 (47.57%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   D  FS    + + +  EA   GV   PV++GPV+YL L K AK V+                  ++  L A G  W+Q DEP+LV +LD+    AF  AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA + L  G ++GRNIW  DL
Sbjct:  129 YIVPEFHADTNFSLDPSRLLQQLAEANAQGVNAKPVILGPVTYLWLGK-AKDVSDRLALLPKLLPVYGA---LLDTLTAQGVEWVQIDEPILVTELDAEWRQAFRTAYAALET--RRIKLLLATYFGQLQDNL--TLAASLPVDGLHIDAINARDEVDALVRELPAERVLSVGAINGRNIWKTDL 305          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_NEIMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.168e-19
Identity = 63/185 (34.05%), Postives = 93/185 (50.27%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE   D +F   +   V + +EA+ LG++  P ++GP+++L + K  KG  + F              E+++ L  AGA WIQ DEP L +DL    + A+ + YA L        +L+ TYF  V AE    L SL  V     DLVR  + L+         K L AG++DGRNIW  +L
Sbjct:  120 YLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKE-KGTVE-FNRLSLLQKLLPVYVEILNALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKV--SAKILLSTYFGSV-AEHAALLKSLP-VDGLHIDLVRAPEQLDAFAD---YDKVLSAGIIDGRNIWRANL 295          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.168e-19
Identity = 63/191 (32.98%), Postives = 95/191 (49.74%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLL----SKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKS-GFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE       +    K   EY EAK LG+E+ PVLIG  +   L     K  + +AK                E+  +L     +W++ DEP LV DL    +  F E Y EL +    L +L+++YF D+  + +  L   K   A G D + G ++L L++  GF   K LFAG+++G+NI+AND A
Sbjct:  122 YLVPECDDASIIALTGDKIFKEYLEAKELGIESKPVLIGIFTLFKLIAFKDKKTQKLAKE--------KLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDIALFEEFYQELLNHKKDLKILLQSYFGDL-RDIYPKLLESK-FDALGLDFIEGKQSLALVQQYGFAKDKILFAGLINGKNIYANDYA 302          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.168e-19
Identity = 68/188 (36.17%), Postives = 91/188 (48.40%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKP---AKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPEL P   F  A      + KEA+ LG    PV+ GP+++L L K    A+G A                 EV+  L   G  W+Q DEP LV+DL      A+   YA+L +  S + +L+ TYF D   +   T  +L  V     DLVR    L  + SG   G+ L AGV++GRNIW  DL
Sbjct:  125 YIVPELTPGQTFRVAREDLFEQVKEAQALGHRVKPVIPGPLTWLWLGKGDAFAQG-AGDIGKLQLLDALLPVYGEVLERLAGLGVEWVQIDEPALVLDLPQAWRDAYQAVYAKLAA--SPVKLLLATYF-DGLKDNLATALALP-VAGLHVDLVRAPDQLSDVASGLRPGQVLSAGVINGRNIWRTDL 307          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_DICDI1.857e-1929.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU2.426e-1933.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMA2.426e-1934.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIG2.426e-1935.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIE2.426e-1935.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH2.426e-1932.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCA2.426e-1932.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMF3.168e-1934.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD3.168e-1932.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPE3.168e-1936.175-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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