CF834681

Overview
NameCF834681
Unique NameCF834681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:81..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.562e-61
Identity = 115/144 (79.86%), Postives = 125/144 (86.81%), Query Frame = -1
Query:  167 FIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWI*E 598
            FIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP +SA GTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH  I E
Sbjct:    1 FIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDIGRNVIHGSDAVESARKEIALWFPEGIAEWQSSLHSCIYE 144          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK1_SACOF (Nucleoside diphosphate kinase 1 OS=Saccharum officinarum GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.652e-61
Identity = 112/148 (75.68%), Postives = 124/148 (83.78%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWI*E 610
            ME TFIMIKPDGVQRGL+GEII RFEKKGF LK LKL+ V+R FAEKHY DLSSKPFF  L++YI SGPVVAM+WEG+ VV TGR IIGATNP  S PGTIRGD A+  GRN+IHGSDS+ESA KEIALWFP+G  +WQSS HPWI E
Sbjct:    1 MESTFIMIKPDGVQRGLIGEIISRFEKKGFYLKALKLVNVERSFAEKHYADLSSKPFFQGLVDYIISGPVVAMVWEGKSVVTTGRKIIGATNPLVSEPGTIRGDFAVDIGRNVIHGSDSIESANKEIALWFPEGLADWQSSQHPWIYE 148          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSJ (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica GN=NDKR PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.288e-58
Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWI*E 610
            MEQ+FIMIKPDGVQRGL+G+II RFEKKGF L+G+K M V+R FA++HY DLS KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWI E
Sbjct:    1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.288e-58
Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWI*E 610
            MEQ+FIMIKPDGVQRGL+G+II RFEKKGF L+G+K M V+R FA++HY DLS KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWI E
Sbjct:    1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.794e-52
Identity = 96/153 (62.75%), Postives = 120/153 (78.43%), Query Frame = -1
Query:  167 NLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWI*E 622
            +++E+E+T+IMIKPDGVQRGLVGEII RFEKKGF L GLKL    +  AE+HY+DL SKPFF  LI+YITSGPVV M WEG GVV + R +IGATNP  + PGTIRGDLA+ TGRN++HGSDS ++ ++EIALWF +G + +W     PW+ E
Sbjct:   80 SMEEVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIALWFGEGELCSWTPVQEPWLIE 232          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.658e-50
Identity = 93/153 (60.78%), Postives = 121/153 (79.08%), Query Frame = -1
Query:  167 NLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWI*E 622
            +++++E+T+IM+KPDG+QRGLVGEII RFEKKGF L GLK+    +  AE+HY+DLS+K FF +LIEYITSGPVV M WEG GVV + R +IG T+P Q+ PGTIRGDLA+ TGRNI+HGSDS E+ ++EI LWF +G +  W S+L  W+ E
Sbjct:   79 SMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_SYNY3 (Nucleoside diphosphate kinase OS=Synechocystis sp. (strain PCC 6803) GN=ndk PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI*E 610
            ME+TFIMIKPDGVQR L+GEI+ RFEKKGF L  +K+MTV +  AEKHYE L+ KPFF  L+ +I S PVVAM+WEG  +V T R +IGAT+P  +APGTIRGD  +  GRNIIHGSD++E+A++EI+LWF D  +N W ++L+PW+ E
Sbjct:    1 MERTFIMIKPDGVQRQLIGEIVGRFEKKGFKLVAMKVMTVSQELAEKHYEALNDKPFFSGLVNFICSSPVVAMVWEGNSIVSTSRQMIGATDPHAAAPGTIRGDYGVSVGRNIIHGSDAIETAKREISLWFKDEEVNEWDATLNPWLYE 149          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_NOSP7 (Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndk PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 96/149 (64.43%), Postives = 115/149 (77.18%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWI*E 610
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFFGSL+E+ITS PVVAM+WEG+GVV + R IIGATNP  S PGTIRGD  I  GRN+IHGSD+ E+AQ+EIALWF D   +NWQ  + PW+ E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLKVSKELAEQHYGVHRERPFFGSLVEFITSSPVVAMVWEGDGVVASARKIIGATNPLTSEPGTIRGDFGINIGRNLIHGSDAPETAQQEIALWFKDEELVNWQPHITPWLHE 149          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.231e-50
Identity = 94/149 (63.09%), Postives = 115/149 (77.18%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWI*E 610
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW+ E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_ANASP (Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.231e-50
Identity = 94/149 (63.09%), Postives = 115/149 (77.18%), Query Frame = -1
Query:  167 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWI*E 610
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW+ E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
The following BLAST results are available for this feature:
BLAST of CF834681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SOLLC3.562e-6179.86Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]
NDK1_SACOF4.652e-6175.68Nucleoside diphosphate kinase 1 OS=Saccharum offic... [more]
NDK1_ORYSJ6.288e-5869.59Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK1_ORYSI6.288e-5869.59Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK2_TOBAC8.794e-5262.75Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK2_ARATH1.658e-5060.78Nucleoside diphosphate kinase II, chloroplastic OS... [more]
NDK_SYNY34.825e-5061.07Nucleoside diphosphate kinase OS=Synechocystis sp.... [more]
NDK_NOSP74.825e-5064.43Nucleoside diphosphate kinase OS=Nostoc punctiform... [more]
NDK_ANAVT8.231e-5063.09Nucleoside diphosphate kinase OS=Anabaena variabil... [more]
NDK_ANASP8.231e-5063.09Nucleoside diphosphate kinase OS=Anabaena sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834681 ID=CF834681; Name=CF834681; organism=Citrus sinensis; type=EST; length=661bp
CCTTTTTTTTTGAAGCAGCCAACATAACCAGGATTGGTCTCAATTTAACT
CAATACTTCATAACAGTTCACCAACAAGGAGTAACCATAAATAAGGAAAT
AGGGATAGGGATAGGGATAAGTCTAACTGCAGGAACAATTAGGCTCCTCA
ACCAAACATTAGTTTACTCCTAGATCCAAGGGTGAAGGCTGCTCTGCCAG
TTAATAGGGCCATCAGGGAACCACAAGGCGATTTCTTTCTGGGCACTCTC
AACTGAGTCACTTCCATGGATGATATTCCTGCCCGTCACGATAGCCAAAT
CACCACGGATGGTTCCAGGAGCAGACTGCGCAGGGTTGGTGGCTCCAATA
ATAGTGCGGCCAGTCTTAACAACACCTTCACCCTCCCAAATCATAGCAAC
AACAGGACCAGAGGTAATGTACTCAATCAGAGAACCAAAGAAAGGCTTCG
ATGACAAATCCTCATAGTGCTTCTCAGCAAAAGGGCGGTCCACAGTCATA
AGCTTCAAACCCTTCAAGGAGAAACCCTTCTTCTCAAATCTGATGATGAT
TTCACCAACAAGGCCTCTTTGGACCCCATCGGGCTTGATCATGATGAAAG
TTTGTTCCATTTCTTTGAGATTCAGAGAAACCAACTTGTTTTGAGAATTG
AGTGAAATAGC
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