CF834681

Overview
NameCF834681
Unique NameCF834681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_NEUCR (Nucleoside diphosphate kinase OS=Neurospora crassa GN=ndk-1 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.552e-48
Identity = 93/152 (61.18%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  167 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI*E 619
            +   EQTFI +KPDGVQRGLVG II RFE +GF L  +KL    +   EKHYEDL++KPFF  LI+Y+ SGP+ AM+WEG+  VKTGRTI+GATNP  SAPGTIRGD A+  GRN+ HGSDSVE+A+KEIALWF    +N W      WI E
Sbjct:    1 MSNQEQTFIAVKPDGVQRGLVGNIISRFENRGFKLVAMKLTQPGQAHLEKHYEDLNTKPFFAGLIKYMNSGPICAMVWEGKDAVKTGRTILGATNPLASAPGTIRGDFALDMGRNVCHGSDSVENAKKEIALWFKPEELNQWNHHSAAWIFE 152          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK_EMENI (Nucleoside diphosphate kinase OS=Emericella nidulans GN=swoH PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.027e-48
Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = -1
Query:  167 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI*E 607
            EQTFI IKPDGVQRGLVG II RFE +GF L  +KL +  R   E+HY DL  KPFF  L+ Y+ SGP+VAM+WEG+ VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVESA+KEI LWF P+   N++ +   WI E
Sbjct:    4 EQTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPGLVTYMLSGPIVAMVWEGKDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVESAKKEIGLWFTPEEIQNYKLNAFGWIYE 151          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKA_DROYA (Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba GN=awd PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.458e-48
Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = -1
Query:  167 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWI*E 607
            E+TFIM+KPDGVQRGLVG+II RFE+KGF L  LK     +   EKHY DLS++PFF  L+ Y+ SGPVV M+WEG  VVKTGR ++GATNPA S PGTIRGD  I  GRNIIHGSD+VESA+KEIALWF +   + W  +   WI E
Sbjct:    3 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 150          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKA_DROME (Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 3.458e-48
Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = -1
Query:  167 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWI*E 607
            E+TFIM+KPDGVQRGLVG+II RFE+KGF L  LK     +   EKHY DLS++PFF  L+ Y+ SGPVV M+WEG  VVKTGR ++GATNPA S PGTIRGD  I  GRNIIHGSD+VESA+KEIALWF +   + W  +   WI E
Sbjct:    6 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 153          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKB_RAT (Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.516e-48
Identity = 92/152 (60.53%), Postives = 113/152 (74.34%), Query Frame = -1
Query:  167 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI*E 619
            +  +E+TFI IKPDGVQRGLVGEII RFE+KGF L  +K +       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  I+++S  H W+ E
Sbjct:    1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFKPEELIDYKSCAHDWVYE 152          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKA1_BOVIN (Nucleoside diphosphate kinase A 1 OS=Bos taurus GN=NME1-1 PE=1 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 4.516e-48
Identity = 93/148 (62.84%), Postives = 111/148 (75.00%), Query Frame = -1
Query:  167 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI*E 607
            E+TFI IKPDGVQRGL+GEII RFE+KGF L  +K M       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEIALWF P+  +N++S    WI E
Sbjct:    5 ERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIALWFHPEELVNYKSCAQNWIYE 152          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.516e-48
Identity = 86/148 (58.11%), Postives = 116/148 (78.38%), Query Frame = -1
Query:  173 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 613
            EME+TFI IKPDGVQRGL+ EII RFE+KGF L G+K++   + FA+KHY DL  +PFF  L ++++SGPV+AM+WEG+GV++ GR +IGAT+P +S PGTIRGDLA+  GRNIIHGSD  E+A+ EI+LWF P   +++ S+   W+
Sbjct:   87 EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISLWFKPQELVSYTSNSEKWL 234          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKA_PONAB (Nucleoside diphosphate kinase A OS=Pongo abelii GN=NME1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.899e-48
Identity = 94/148 (63.51%), Postives = 110/148 (74.32%), Query Frame = -1
Query:  167 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI*E 607
            E+TFI IKPDGVQRGLVGEII RFE+KGF L GLK M       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  +++ S    WI E
Sbjct:    5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE 152          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKA_HUMAN (Nucleoside diphosphate kinase A OS=Homo sapiens GN=NME1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.899e-48
Identity = 94/148 (63.51%), Postives = 110/148 (74.32%), Query Frame = -1
Query:  167 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI*E 607
            E+TFI IKPDGVQRGLVGEII RFE+KGF L GLK M       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  +++ S    WI E
Sbjct:    5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE 152          
BLAST of CF834681 vs. ExPASy Swiss-Prot
Match: NDKB_MOUSE (Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.704e-48
Identity = 92/152 (60.53%), Postives = 113/152 (74.34%), Query Frame = -1
Query:  167 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI*E 619
            +  +E+TFI IKPDGVQRGLVGEII RFE+KGF L  +K +       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  I+++S  H W+ E
Sbjct:    1 MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELIDYKSCAHDWVYE 152          
The following BLAST results are available for this feature:
BLAST of CF834681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_NEUCR1.552e-4861.18Nucleoside diphosphate kinase OS=Neurospora crassa... [more]
NDK_EMENI2.027e-4864.19Nucleoside diphosphate kinase OS=Emericella nidula... [more]
NDKA_DROYA3.458e-4862.84Nucleoside diphosphate kinase (Fragment) OS=Drosop... [more]
NDKA_DROME3.458e-4862.84Nucleoside diphosphate kinase OS=Drosophila melano... [more]
NDKB_RAT4.516e-4860.53Nucleoside diphosphate kinase B OS=Rattus norvegic... [more]
NDKA1_BOVIN4.516e-4862.84Nucleoside diphosphate kinase A 1 OS=Bos taurus GN... [more]
NDK3_ARATH4.516e-4858.11Nucleoside diphosphate kinase III, chloroplastic/m... [more]
NDKA_PONAB5.899e-4863.51Nucleoside diphosphate kinase A OS=Pongo abelii GN... [more]
NDKA_HUMAN5.899e-4863.51Nucleoside diphosphate kinase A OS=Homo sapiens GN... [more]
NDKB_MOUSE7.704e-4860.53Nucleoside diphosphate kinase B OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834681 ID=CF834681; Name=CF834681; organism=Citrus sinensis; type=EST; length=661bp
CCTTTTTTTTTGAAGCAGCCAACATAACCAGGATTGGTCTCAATTTAACT
CAATACTTCATAACAGTTCACCAACAAGGAGTAACCATAAATAAGGAAAT
AGGGATAGGGATAGGGATAAGTCTAACTGCAGGAACAATTAGGCTCCTCA
ACCAAACATTAGTTTACTCCTAGATCCAAGGGTGAAGGCTGCTCTGCCAG
TTAATAGGGCCATCAGGGAACCACAAGGCGATTTCTTTCTGGGCACTCTC
AACTGAGTCACTTCCATGGATGATATTCCTGCCCGTCACGATAGCCAAAT
CACCACGGATGGTTCCAGGAGCAGACTGCGCAGGGTTGGTGGCTCCAATA
ATAGTGCGGCCAGTCTTAACAACACCTTCACCCTCCCAAATCATAGCAAC
AACAGGACCAGAGGTAATGTACTCAATCAGAGAACCAAAGAAAGGCTTCG
ATGACAAATCCTCATAGTGCTTCTCAGCAAAAGGGCGGTCCACAGTCATA
AGCTTCAAACCCTTCAAGGAGAAACCCTTCTTCTCAAATCTGATGATGAT
TTCACCAACAAGGCCTCTTTGGACCCCATCGGGCTTGATCATGATGAAAG
TTTGTTCCATTTCTTTGAGATTCAGAGAAACCAACTTGTTTTGAGAATTG
AGTGAAATAGC
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