CF834682

Overview
NameCF834682
Unique NameCF834682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:80..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_ACAM1 (Nucleoside diphosphate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=ndk PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 96/149 (64.43%), Postives = 115/149 (77.18%), Query Frame = 2
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 496
            ME+TF+ +KPDGVQRGLVGEII R+E KGF+L GLKLM V R  AE+HY +   KPFF  L+++ITSGPVVAM+WEG+GVV   R IIGATNP  S PGTIRGD  I  GRNIIHGSD+VE+AQ+EI+LWF    + +W  +L  WIYE
Sbjct:    1 MERTFLAVKPDGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPVVAMVWEGKGVVAAARKIIGATNPLGSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLWFKSEELADWSPTLTSWIYE 149          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 94/149 (63.09%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 496
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_ANASP (Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 94/149 (63.09%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 496
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_CYAA5 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain ATCC 51142) GN=ndk PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 91/149 (61.07%), Postives = 119/149 (79.87%), Query Frame = 2
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 496
            ME+TFIMIKPDGVQRGLVGE+I RFE KGF+L GLKLM+V +  AE+HY+    +PFFGSL+E+I S PVVAM+WEG+GVV + R +IGATNP  + PGTIRGD  +  GRN+IHGSD++E+AQ+EI+LWF +  + +W+ +   W+YE
Sbjct:    1 MERTFIMIKPDGVQRGLVGEVIGRFEAKGFTLVGLKLMSVSKELAEEHYDVHKERPFFGSLVEFICSSPVVAMVWEGDGVVASARKLIGATNPLSAEPGTIRGDFGVSVGRNLIHGSDAIETAQREISLWFNEKELSSWEPTAKTWLYE 149          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 93/149 (62.42%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   50 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 493
            E E+TFI IKPDGVQRGL+ EI+ RFE+KGFSL  +K++   RPFA+KHY DL  KPF+  L+ Y +SGPVVAM+WEGEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:    2 EFERTFIAIKPDGVQRGLISEIVARFERKGFSLVAIKVVIPSRPFAQKHYADLKDKPFYVGLVAYWSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVNGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 150          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 91/149 (61.07%), Postives = 118/149 (79.19%), Query Frame = 2
Query:   50 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 493
            EME+TFI IKPDGVQRGL+ EII RFE+KG+ L G+K+M   + FA+KHY DL  +PFF  L  +++SGPVVAM+WEGEGV++ GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI+LWF P+  +++ S+   WIY
Sbjct:   86 EMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 94/153 (61.44%), Postives = 117/153 (76.47%), Query Frame = 2
Query:   41 NLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 496
            +L++++Q +IM+KPDGVQRGLVGEII RFEKKGF L GLKL    +  AE+HY+ L+ K FF  LIEYITSGPVV+M WEG GVV + R +IGAT+P Q+ PGTIRGD A+ TGRNIIHGSDS E+ ++EIALWF +G +  W     PW+ E
Sbjct:   78 SLEQVDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGEREIALWFKEGELCEWTPVQEPWLRE 230          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_EMENI (Nucleoside diphosphate kinase OS=Emericella nidulans GN=swoH PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 96/148 (64.86%), Postives = 112/148 (75.68%), Query Frame = 2
Query:   56 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 496
            EQTFI IKPDGVQRGLVG II RFE +GF L  +KL +  R   E+HY DL  KPFF  L+ Y+ SGP+VAM+WEG+ VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVESA+KEI LWF P+   N++ +   WIYE
Sbjct:    4 EQTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPGLVTYMLSGPIVAMVWEGKDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVESAKKEIGLWFTPEEIQNYKLNAFGWIYE 151          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_TRIEI (Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 95/149 (63.76%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 496
            ME+TFI IKPDGVQRGLVG+II RFE KGF+L GLK+MTV +  AEKHY+    +PFF SLIE+I SGP+VAM+WEGEGVV + R IIGATNP  + PGTIRGD  I  GRN+IHGSD++E+AQ EI LWF +   ++W+ +L  WI E
Sbjct:    1 MERTFIAIKPDGVQRGLVGQIISRFETKGFTLVGLKIMTVTKELAEKHYDVHKERPFFSSLIEFIKSGPLVAMVWEGEGVVASARKIIGATNPLTAEPGTIRGDYGISLGRNLIHGSDAIETAQTEINLWFKEEELVSWKPTLTSWIVE 149          
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 90/149 (60.40%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   50 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 493
            E E+TFI IKPDGVQRGL+ EI+ RFE+KGF L  +K++   + FA+KHY DLS +PFF  L ++++SGPVVAM+WEGEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:   84 EFERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 232          
The following BLAST results are available for this feature:
BLAST of CF834682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_ACAM11.227e-5064.43Nucleoside diphosphate kinase OS=Acaryochloris mar... [more]
NDK_ANAVT1.603e-5063.09Nucleoside diphosphate kinase OS=Anabaena variabil... [more]
NDK_ANASP1.603e-5063.09Nucleoside diphosphate kinase OS=Anabaena sp. (str... [more]
NDK_CYAA52.094e-5061.07Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK3_SPIOL2.094e-5062.42Nucleoside diphosphate kinase 3 OS=Spinacia olerac... [more]
NDK4_ARATH2.735e-5061.07Nucleoside diphosphate kinase IV, chloroplastic/mi... [more]
NDK2_PEA4.664e-5061.44Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK_EMENI1.039e-4964.86Nucleoside diphosphate kinase OS=Emericella nidula... [more]
NDK_TRIEI1.357e-4963.76Nucleoside diphosphate kinase OS=Trichodesmium ery... [more]
NDK4_SPIOL1.357e-4960.40Nucleoside diphosphate kinase 4, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834682 ID=CF834682; Name=CF834682; organism=Citrus sinensis; type=EST; length=648bp
TGCTATTTCACTCTTTTCTCAAAACAAGTTGGTTTCTCTGAATCTCAAAG
AAATGGAACAAACTTTCATCATGATCAAGCCCGATGGGGTCCAAAGAGGC
CTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAGGGTTTCTCCTTGAA
GGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGCTGAGAAGCACTATG
AGGATTTGTCATCGAAGCCTTTCTTTGGTTCTCTGATTGAGTACATTACC
TCTGGTCCTGTTGTTGCTATGATTTGGGAGGGTGAAGGTGTTGTTAAGAC
TGGCCGCACTATTATTGGAGCCACCAACCCTGCGCAGTCTGCTCCTGGAA
CCATCCGTGGTGATTTGGCTATCGTGACGGGCAGGAATATCATCCATGGA
AGTGACTCAGTTGAGAGTGCCCAGAAAGAAATCGCCTTGTGGTTCCCTGA
TGGCCCTATTAACTGGCAGAGCAGCCTTCACCCTTGGATCTATGAGTAAA
CTAATGTTTGGTTGAGGAGCCTAATTGTTCCTGCAGTTAGACTTATCCCT
ATCCCTATCCCTATTTCCTTATTTATGGTTACTCCTTGTTGGTGAACTGT
TATGAAGTATTGAGTTAAATTGAGACCAATCCTGGTTATGTTGGCTGC
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