CF834687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_PROSL (Probable crotonobetaine/carnitine-CoA ligase OS=Proteus sp. (strain LE138) GN=caiC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.574e-17 Identity = 52/157 (33.12%), Postives = 81/157 (51.59%), Query Frame = -3 Query: 204 LPHNHRGEICIRGPQ---IMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 +P+ GEIC++G + K Y N P+AT ++ +GWLHT DR +IK G V EIE ++ SHP I D AV+ D++ E AFVV +G L+EEA + + + +K + F +P++ SGK+++K L+ Sbjct: 362 VPNGVVGEICVKGEAGKTLFKEYYNRPDATEKALEPDGWLHTGDYGYRDDEGFFYFVDRSCNMIKRGGENVSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVDGETLSEEAFFAFCEQNMAKFKVPSAVEFKQGLPRNCSGKVIKKHLQ 518
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_PROMH (Probable crotonobetaine/carnitine-CoA ligase OS=Proteus mirabilis (strain HI4320) GN=caiC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.574e-17 Identity = 52/157 (33.12%), Postives = 81/157 (51.59%), Query Frame = -3 Query: 204 LPHNHRGEICIRGPQ---IMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 +P+ GEIC++G + K Y N P+AT ++ +GWLHT DR +IK G V EIE ++ SHP I D AV+ D++ E AFVV +G L+EEA + + + +K + F +P++ SGK+++K L+ Sbjct: 362 VPNGVVGEICVKGEPGKTLFKEYYNRPDATEKALEPDGWLHTGDYGYQDDEGFFYFVDRSCNMIKRGGENVSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVDGETLSEEAFFAFCEQNMAKFKVPSAVEFKQGLPRNCSGKVIKKHLQ 518
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_ECO27 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=caiC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.574e-17 Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = -3 Query: 204 LPHNHRGEICIRG---PQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 LP GEICI+G I K Y +P+ATA +++ +GWLHT DR +IK G V E+E ++ +HP I D VV KD + E AFVV + G L+EE + + + +K L + +P++ SGKI+RK+L+ Sbjct: 361 LPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVLSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: ACSF2_MOUSE (Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.574e-17 Identity = 55/187 (29.41%), Postives = 88/187 (47.06%), Query Frame = -3 Query: 177 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLRAKLASSMPL 737 K+GS G ++ + E ++++ E G N GE+ IRG +M+GY +P+ T + + W T R K++I G + P+E+E L HP + +A VV KDE GE A + +G E IK + ++ +K I FV P + SGKI + LR ++ + L Sbjct: 429 KAGSVGRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKAFCKGKISHFKIPRYIVFVEGYPLTISGKIQKFKLREQMEQHLKL 615
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_SHIDS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = -3 Query: 204 LPHNHRGEICIRG---PQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 LP GEICI+G I K Y +P+ATA +++ +GWLHT DR +IK G V E+E ++ +HP I D VV KD + E AFVV + G L+EE + + + +K + +P++ SGKI+RK+L+ Sbjct: 361 LPAGEIGEICIKGVLGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKVLPRNCSGKIIRKNLK 517
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: ACS2A_HUMAN (Acyl-coenzyme A synthetase ACSM2A, mitochondrial OS=Homo sapiens GN=ACSM2A PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 62/190 (32.63%), Postives = 94/190 (49.47%), Query Frame = -3 Query: 198 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQI-----MKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGF-----ELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLRAK 737 K G GT ++++ID + G LP G+I IR I GY+++P+ TAA I + WL R +II G+++ PSE+E L+ HP++ + AV+ D V GEV AFVV ++ F E + +++++ YK KI FV +PK+ +GKI R LR K Sbjct: 379 KPGYMGTAASCYDVQIIDDK-GNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWL-LGDRGIKDEDGYFQFMGRANDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDK 566
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLU (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = -3 Query: 204 LPHNHRGEICIRG---PQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 LP GEICI+G I K Y +P+ATA +++ +GWLHT DR +IK G V E+E ++ +HP I D VV KD + E AFVV + G L+EE + + + +K + +P++ SGKI+RK+L+ Sbjct: 361 LPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLI (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12) GN=caiC PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = -3 Query: 204 LPHNHRGEICIRG---PQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 LP GEICI+G I K Y +P+ATA +++ +GWLHT DR +IK G V E+E ++ +HP I D VV KD + E AFVV + G L+EE + + + +K + +P++ SGKI+RK+L+ Sbjct: 361 LPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLC (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiC PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = -3 Query: 204 LPHNHRGEICIRG---PQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 LP GEICI+G I K Y +P+ATA +++ +GWLHT DR +IK G V E+E ++ +HP I D VV KD + E AFVV + G L+EE + + + +K + +P++ SGKI+RK+L+ Sbjct: 361 LPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: CAIC_ECODH (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12 / DH10B) GN=caiC PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = -3 Query: 204 LPHNHRGEICIRG---PQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 665 LP GEICI+G I K Y +P+ATA +++ +GWLHT DR +IK G V E+E ++ +HP I D VV KD + E AFVV + G L+EE + + + +K + +P++ SGKI+RK+L+ Sbjct: 361 LPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517 The following BLAST results are available for this feature:
BLAST of CF834687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834687 ID=CF834687; Name=CF834687; organism=Citrus sinensis; type=EST; length=739bpback to top |