CF834699

Overview
NameCF834699
Unique NameCF834699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834699 vs. ExPASy Swiss-Prot
Match: API8_SOLTU (Aspartic protease inhibitor 8 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 60/203 (29.56%), Postives = 96/203 (47.29%), Query Frame = 1 
Query:   49 THSLLGITSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLIFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PTRCNKIGVSTKDGVRRLLLVGDHEPALNVLF 615
            + +L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P           ++    P   +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRL LV  +E  L+VLF
Sbjct:   24 SQNLIDLPSESPLPKPVLDTNGKELNPDSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217
The following BLAST results are available for this feature:
BLAST of CF834699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
API8_SOLTU8.094e-1129.56Aspartic protease inhibitor 8 OS=Solanum tuberosum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834699 ID=CF834699; Name=CF834699; organism=Citrus sinensis; type=EST; length=684bp
GAAGACTTCATCTTTTAAACACTCTCCTTCCTTATCCTTACCTTGGCCAC
GCATTCTCTATTGGGCATCACATCAAACTCTGAACCTGTCTTAGATATCA
TTGGCAACAAGGTCAAATCCACCCTCGAGTATAAACTTATCCCAGTCCTA
GATGGCGCCGGTGGATTCAGCACACACCTAGGCACAAATGGACAGTGTCC
CTTGGACGTTATCCAATTAAGTTCTCCTAGCGAAAGGGGAGATAATTTAA
GATTACTTCCGTACGACAATTACAAAATTGTCAAGGTATCCACTGATGTC
AACCTGATATTCCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAACC
ATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTGTAACCGGCGGAA
GTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATTGAG
AAAGCTGGAAATTTTTCATATGGTGGTGTATACAATATTGTCCATTGTCC
GAGTGTCTGTCTATCTTGTCCTACACGCTGCAACAAAATTGGCGTTTCAA
CTAAGGATGGCGTTCGACGTCTGCTTCTAGTTGGTGATCATGAACCGGCT
TTGAATGTTCTGTTTTTTCCATCAGAGGAAAGCTCAAGGCTACTTCAAGC
TGCTAACGCAATATCAAGGTTTTTTGAAGCTGCT
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