CF834700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_PSEAK (Photosystem I assembly protein ycf3 OS=Pseudendoclonium akinetum GN=ycf3 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30 Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQ+EG YAEALQNYY+A++LEIDPYDRSYILYNIGLIHTSNG+H +ALEYY++AL+RNP LPQA NN+AVI H Sbjct: 43 MSAQAEGEYAEALQNYYQALKLEIDPYDRSYILYNIGLIHTSNGKHGRALEYYYQALKRNPSLPQALNNIAVIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_CHLVU (Photosystem I assembly protein ycf3 OS=Chlorella vulgaris GN=ycf3 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.444e-30 Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQSEG YAEALQNYYEA+RLE D YDRSYILYNIGLIHTSNG+H +AL+YY++ALERNP LPQA NN+AVI H Sbjct: 43 MSAQSEGEYAEALQNYYEALRLETDAYDRSYILYNIGLIHTSNGDHARALDYYYQALERNPSLPQALNNIAVIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_OLTVI (Photosystem I assembly protein ycf3 OS=Oltmannsiellopsis viridis GN=ycf3-A PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.446e-30 Identity = 60/75 (80.00%), Postives = 69/75 (92.00%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 M+AQ+EG YAEALQNYY+A+RLEIDPYDRSYILYNIGLI+T NGEH +ALEYY++ALERNP LPQA NN+AVI H Sbjct: 43 MAAQAEGEYAEALQNYYQALRLEIDPYDRSYILYNIGLIYTCNGEHGRALEYYYQALERNPSLPQALNNIAVIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_CHLRE (Photosystem I assembly protein ycf3 OS=Chlamydomonas reinhardtii GN=ycf3 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 9.289e-30 Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQ+EG YAEALQNYYEAMRLE+D YDRSYILYNIGLIHTSNGEH +ALEYY++ALERNP L A NN+AVI H Sbjct: 43 MSAQAEGEYAEALQNYYEAMRLEVDAYDRSYILYNIGLIHTSNGEHGRALEYYYQALERNPSLSSALNNIAVIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_GRATL (Photosystem I assembly protein ycf3 OS=Gracilaria tenuistipitata var. liui GN=ycf3 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.021e-29 Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQSEG YAEAL+NYYEA+RLE DPYDRSYI+YNIGLI+ SNGEH KALEYY ++LE NP LPQAFNN+A+I H Sbjct: 43 MSAQSEGEYAEALENYYEALRLEEDPYDRSYIIYNIGLIYASNGEHIKALEYYHQSLELNPRLPQAFNNIAIIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_BIGNA (Photosystem I assembly protein ycf3 OS=Bigelowiella natans GN=ycf3 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.304e-27 Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQSEG YAEALQNYY+A+R EID YDRSY+LYNIGLIH+SNG+ +KALEYY++AL+RNP L QA NN+A I H Sbjct: 43 MSAQSEGEYAEALQNYYQALRYEIDAYDRSYMLYNIGLIHSSNGQQSKALEYYYQALDRNPRLSQALNNIATIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_CYAPA (Photosystem I assembly protein ycf3 OS=Cyanophora paradoxa GN=ycf3 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.635e-27 Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQSEG YAEAL+NYYEA+RLE DPYD+SY YNI LIHTSNG+ TKALEYY +AL+ NP +PQA NNMAVI H Sbjct: 43 MSAQSEGAYAEALENYYEALRLEEDPYDKSYTFYNIALIHTSNGDQTKALEYYRQALDLNPKMPQALNNMAVIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_TRIEI (Photosystem I assembly protein ycf3 OS=Trichodesmium erythraeum (strain IMS101) GN=ycf3 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 7.360e-27 Identity = 56/75 (74.67%), Postives = 64/75 (85.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQ++G YAEAL+NYYEA+ LE DP DRSYILYNIGLIH SNGEH +ALEYY +ALE NP +PQA NN+AVI H Sbjct: 43 MSAQADGEYAEALENYYEALNLEDDPNDRSYILYNIGLIHASNGEHDQALEYYHQALENNPRMPQALNNIAVIFH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_GUITH (Photosystem I assembly protein ycf3 OS=Guillardia theta GN=ycf3 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.141e-26 Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQSEG YAEAL+NYYEA+RLE DPYDRSYILYNIGLI+ SNGE+ KALEYY +AL+ N LP A NN+AVI H Sbjct: 43 MSAQSEGEYAEALENYYEALRLEEDPYDRSYILYNIGLIYASNGEYVKALEYYHQALDLNSQLPAALNNIAVIYH 117
BLAST of CF834700 vs. ExPASy Swiss-Prot
Match: YCF3_RHDSA (Photosystem I assembly protein ycf3 OS=Rhodomonas salina GN=ycf3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.797e-26 Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = -1 Query: 51 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 275 MSAQSEG YAEAL+NYYEA+RLE DPYDRSYILYNIGLI+ SNGE+ KALEYY +AL+ N LP A NN+AVI H Sbjct: 43 MSAQSEGEYAEALENYYEALRLEEDPYDRSYILYNIGLIYASNGEYIKALEYYHQALDLNSRLPPALNNIAVIYH 117 The following BLAST results are available for this feature:
BLAST of CF834700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834700 ID=CF834700; Name=CF834700; organism=Citrus sinensis; type=EST; length=461bpback to top |