CF834701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNY3 (Photosystem I assembly protein ycf3 OS=Synechocystis sp. (strain PCC 6803) GN=ycf3 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 7.284e-22 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 415 MSAQ++G YAEAL NY EA+RLE +P DRSYILYN+ LIH SNG+H KAL Y A+E NP +P A NN+AVI H+ Sbjct: 43 MSAQADGEYAEALDNYEEALRLEENPNDRSYILYNMALIHASNGDHEKALGLYQEAIELNPKMPSALNNIAVIYHF 118
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNJA (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain JA-3-3Ab) GN=ycf3 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.623e-21 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 415 M+AQSEG YAEAL+NY EA+ LE D DRSYILYN+GLI+ SNGE KALEYY +ALE NP L A NN+AV+ H+ Sbjct: 44 MAAQSEGEYAEALENYREALALEQDDEDRSYILYNMGLIYQSNGELDKALEYYHQALELNPRLCSALNNIAVLLHH 119
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNR3 (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain RCC307) GN=ycf3 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.615e-21 Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYV 418 MSAQ +G YAEAL+NY EA+RLE DP DR++ILYN+ L++ SNGEH +ALE Y +AL N +PQ NNMAVI H++ Sbjct: 43 MSAQGDGEYAEALENYQEALRLEEDPNDRAFILYNMALVYASNGEHNRALEQYEQALALNAKMPQVLNNMAVIHHHL 119
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_CYAME (Photosystem I assembly protein ycf3 OS=Cyanidioschyzon merolae GN=ycf3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.166e-21 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 412 M+AQ+EG YA+AL++YY A+ E D DRSYI+YNIGLI+ SNGE +ALEYY +ALE NP L QA NN+AVI H Sbjct: 43 MAAQAEGEYAQALESYYHALEFEEDVIDRSYIIYNIGLIYASNGEDEQALEYYHQALELNPRLVQALNNIAVIYH 117
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_ACAM1 (Photosystem I assembly protein ycf3 OS=Acaryochloris marina (strain MBIC 11017) GN=ycf3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.166e-21 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 415 M+AQ +GNYA+AL NY EA+ LE DP+D+SYILYN+GLI +NG+H KAL+YY ++LE NP L QA N VI HY Sbjct: 39 MAAQVDGNYAKALGNYTEALALEEDPFDKSYILYNMGLIFANNGDHEKALDYYHQSLELNPNLVQALYNTGVILHY 114
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNJB (Photosystem I assembly protein ycf3 OS=Synechococcus sp. GN=ycf3 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.052e-20 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 415 M+AQSEG YAEAL+NY EA+ LE DRSYILYN+GLI+ SNGE KALEYY +ALE NP L A NN+AV+ H+ Sbjct: 44 MAAQSEGEYAEALENYREALALEQGEEDRSYILYNMGLIYQSNGELDKALEYYHQALELNPRLCSALNNIAVLLHH 119
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_THAPS (Photosystem I assembly protein ycf3 OS=Thalassiosira pseudonana GN=ycf3 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.220e-20 Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 412 M+AQ+EG+YAEAL+NYYE++ L+ D YDRSY LYNIGLI+ N + +ALEYY +A+ N LPQA NN+A I H Sbjct: 39 MAAQAEGDYAEALENYYESLYLDEDQYDRSYTLYNIGLIYAKNENYPRALEYYHQAVSLNSNLPQALNNIAAIYH 113
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNS9 (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain CC9902) GN=ycf3 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 6.603e-15 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 406 +SAQ++G+YAEAL+NY EA++LE DP DR L N+ +I+ SNGE +A+E Y +AL+ NP P NM +I Sbjct: 43 LSAQNDGDYAEALENYDEALKLETDPTDRGETLKNMAIIYMSNGEEERAIETYQKALDENPKQPSCLKNMGLI 115
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNSC (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain CC9605) GN=ycf3 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.280e-14 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 406 +SAQ++G+YAEAL+NY EA++LE + DRS L N+ +I+ SNGE +A+E Y +ALE NP P NM +I Sbjct: 43 LSAQNDGDYAEALENYEEALKLEENSTDRSETLKNMAIIYMSNGEEERAIETYRKALEENPNQPSCLKNMGLI 115
BLAST of CF834701 vs. ExPASy Swiss-Prot
Match: YCF3_SYNS3 (Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain CC9311) GN=ycf3 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.245e-13 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 188 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVI 406 +SAQ++G+YAEAL+NY E+++LE + DR L NI +I+ SNGE +ALE Y +AL+ NP P NM +I Sbjct: 43 LSAQNDGDYAEALENYEESLKLEENAIDRGETLKNIAIIYMSNGEEERALETYQKALDENPKQPSCLKNMGLI 115 The following BLAST results are available for this feature:
BLAST of CF834701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834701 ID=CF834701; Name=CF834701; organism=Citrus sinensis; type=EST; length=464bpback to top |