CF834710

Overview
NameCF834710
Unique NameCF834710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1217 contig Csv1_Contig1217:274..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834710 vs. ExPASy Swiss-Prot
Match: CCPR2_CANAL (Putative heme-binding peroxidase OS=Candida albicans GN=CCP2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17
Identity = 62/189 (32.80%), Postives = 86/189 (45.50%), Query Frame = 2
Query:   17 R*AFGAVQEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERELLTGE-------------------------------------KDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 463
            R A   +++++P ISYADL+ LAG V +E  GGP I +  GR D       P  G LP A +  +H+R+ F  ++G +D+  VAL G H +GRCHK      G+                                        L+ L +D  L+ D  +   VE YA DE  FF D++ A  KL ELG
Sbjct:   98 RAALEPIKQRYPAISYADLWTLAGKVAIEYMGGPTIIWKSGRVDYTNDRCTPSNGLLPFADKDANHIRKTF-TRLGYNDQQTVALIGAHGVGRCHKRFSGWEGKWTRTPKTFSNQFYVVLLNETWSQGEVPETGKTQYFNADKSLIMLNTDMELIRDKSYLHWVEIYAKDEPKFFHDFSSAFAKLLELG 285          
BLAST of CF834710 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   41 EQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGR----------------CHKERELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELG 463
            ++   +S+AD+  +AG   V + GGP IP   GR D A+P  EG+LP        L++ F  + G S +++VALSG HT+G                   ++    T +   ++ LPSD AL+ D      V++YA D+D FF D+  A++KL   G
Sbjct:  168 DEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECF-KRKGFSTQELVALSGAHTIGSKGFGDPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDFTNAYIKLVNSG 323          
The following BLAST results are available for this feature:
BLAST of CF834710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CCPR2_CANAL1.576e-1732.80Putative heme-binding peroxidase OS=Candida albica... [more]
APX6_ARATH1.334e-1633.12Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834710 ID=CF834710; Name=CF834710; organism=Citrus sinensis; type=EST; length=698bp
CCCGGCCCGATATTGCCGTTAGGCTTTTGGAGCCGTTCAGGAGCAGTTCC
CTACCATCTCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTT
GAGGTTACCGGTGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAA
GGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATG
ATCACTTGAGGCAAGTCTTCGGTGCTCAGATGGGCCTCAGCGACAAGGAT
ATTGTTGCTCTCTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAG
GGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCTGACA
AGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCT
GCGGATGAGGACGCTTTCTTCACTGATTATGCTGAGGCTCATCTCAAGCT
CTCTGAGCTAGGATTTGCCGAAGCCTAAAGTTACCTGAGTAAATAAATGG
TTGGAATGATGCCAACAACAGTGTGCCTCTATTTTATGTTTTTTGAATTC
TCAGAAAATTCGAATTTCAAGATGTTGTTGGTTGAATTTTGTGGTTTTGT
TTTGTTGCACATGGTGGATTGTGAAAAGTTGGGTCGAATACTATGGTTAC
TATCATCCTTTAGAACTAATAATATCAACTTTTTTCAGACTAAAAAAA
back to top