CF834718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL8_DANRE (60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3) HSP 1 Score: 245.743 bits (626), Expect = 1.855e-64 Identity = 111/158 (70.25%), Postives = 134/158 (84.81%), Query Frame = -3 Query: 233 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 706 G++TGQF+YCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ +RVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI Sbjct: 81 GIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL8_ICTPU (60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 9.206e-64 Identity = 111/158 (70.25%), Postives = 133/158 (84.18%), Query Frame = -3 Query: 233 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 706 G++TGQFV+CGKKA L +GNVLPV +PEG ++C +E GDRG LARASG+YA +ISHNP+ +RVKLPSGAKK+I S RA++G VAGGGR +KP+LKAG AYHK++VKRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRD P G+KVGLI Sbjct: 81 GIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTIICCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGAKKVISSTNRAVVGVVAGGGRIDKPILKAGRAYHKYKVKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDVPAGRKVGLI 238
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.569e-63 Identity = 111/158 (70.25%), Postives = 131/158 (82.91%), Query Frame = -3 Query: 233 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 706 G++TGQF+Y GKKA+L VGNVLP+ S+PEG +V NVE GDRG LARASG+Y +II HNPD + TRV+LPSGAKKII S R +IG +AGGGRT+KPLLKAG A+HK+++KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLI Sbjct: 81 GVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLLKAGRAFHKYKLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_YEAST (60S ribosomal protein L2 OS=Saccharomyces cerevisiae GN=RPL2A PE=1 SV=3) HSP 1 Score: 239.965 bits (611), Expect = 1.018e-62 Identity = 110/158 (69.62%), Postives = 130/158 (82.28%), Query Frame = -3 Query: 233 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 706 G++TGQF+Y GKKA+L VGNVLP+ S+PEG +V NVE GDRG LARASG+Y +II HNPD + TRV+LPSGAKK+I S R +IG +AGGGR +KPLLKAG A+HK+R+KRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLI Sbjct: 81 GVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ASHGO (60S ribosomal protein L2 OS=Ashbya gossypii GN=RPL2 PE=4 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.920e-61 Identity = 105/158 (66.46%), Postives = 128/158 (81.01%), Query Frame = -3 Query: 233 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 706 G++TGQF+Y GK A+L VGN+LP+ S+PEG +V NVE GDRG LAR SG+Y ++I HNPD + TR++LPSGAKKI+ S R +IG +AGGGR +KPLLKAG A+HK++VKRN WPK RGVAMNPV+HPHGGGNHQHIG AST+ R A GQK GLI Sbjct: 81 GVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERPGDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLLKAGRAFHKYKVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLI 238
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_STAMF (50S ribosomal protein L2P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.886e-46 Identity = 89/160 (55.62%), Postives = 110/160 (68.75%), Query Frame = -3 Query: 233 LRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 712 + GMY GQ + G A + GN+LP+ IPEG + N+E GD G R+SG YA+I+ T+V+LPSG +P+ RA IG +AGGGR EKPLLKAGNAYHK++VK WPKVRGVAMN V HPHGGG+HQH+G STV R+ PPG+KVG I Sbjct: 72 VEGMYVGQIIEIGPDAHISNGNILPIGKIPEGTQIANIEKRPGDGGKFVRSSGTYALIVGRA--GTKTQVQLPSGKIIEVPNNARATIGVIAGGGRDEKPLLKAGNAYHKWKVKAKKWPKVRGVAMNAVSHPHGGGSHQHVGKPSTVARETPPGRKVGHI 229
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.103e-44 Identity = 90/160 (56.25%), Postives = 107/160 (66.88%), Query Frame = -3 Query: 233 LRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 712 + GMY GQ + G A + GN+LPV IPEG V N+E GD G RASG YAVI+ T+V+LPSG +P+ RAMIG +AGGGR EKPLLKAG AY+K+ K WPKVRGVAMN HPHGGG+HQH+G STV R+ PPG+KVG I Sbjct: 72 VEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKRPGDGGKFVRASGTYAVIVGRA--GGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKPLLKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKVGHI 229
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.079e-43 Identity = 86/164 (52.44%), Postives = 110/164 (67.07%), Query Frame = -3 Query: 233 FSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 724 + +P G+Y GQ + GK A + GNVLP+ IP+G++VCNVE GD G +AR SG YA++ SH + D ++LPS +K++ + CRA IG VAG GR EKP +KAG Y+ R WP VRGVAMNPV HPHGGG+H+ G +TV R APPGQKVG I Sbjct: 68 YYIPPEGVYEGQEIQIGKGAEVKTGNVLPLSEIPDGSLVCNVEIRPGDGGKIARRSGTYAIVFSH--EGDKVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPFMKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHI 229
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ARCFU (50S ribosomal protein L2P OS=Archaeoglobus fulgidus GN=rpl2p PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.958e-43 Identity = 83/165 (50.30%), Postives = 107/165 (64.85%), Query Frame = -3 Query: 233 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 727 ++ L + G+ TG VY G + GN+ +++IPEG VCN+E GD G RASG + ++S D V++PSG +K CRAMIG VAGGGRT+KP +KAG YHK + K WP+VRGVAMN V+HP GGG HQH+G TV R+APPG+KVG I Sbjct: 66 TYILAVEGLGTGDVVYAGDNVEIASGNITYLKNIPEGTPVCNIEAQPGDGGKFIRASGTFGFVVSREADK--VLVQMPSGKQKWFHPNCRAMIGVVAGGGRTDKPFVKAGKKYHKMKSKAAKWPRVRGVAMNAVDHPFGGGKHQHVGKPKTVSRNAPPGRKVGSI 228
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_METTP (50S ribosomal protein L2P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl2p PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.170e-42 Identity = 86/166 (51.81%), Postives = 107/166 (64.46%), Query Frame = -3 Query: 233 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 730 + + L G Y GQ + CG A + GN LP+ SIPEG +CN+E G G ARASG Y ++++H D T V+LPSG K + C A IG VAGGGRTEKPL+KAG +++K+R K WP+VRGVAMN V+HP GGG QH G TV R PPG+KVG I Sbjct: 65 KQYVLATEGTYIGQEIACGPAAEIQPGNTLPLASIPEGMPICNIESKPGHGGQFARASGVYGILVAH--DVGATVVQLPSGEMKWLNPNCLATIGVVAGGGRTEKPLVKAGKSFYKYRSKAVKWPRVRGVAMNAVDHPFGGGGRQHPGRPKTVSRGTPPGRKVGSI 228 The following BLAST results are available for this feature:
BLAST of CF834718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834718 ID=CF834718; Name=CF834718; organism=Citrus sinensis; type=EST; length=732bpback to top |