CF834719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_LEPBP (50S ribosomal protein L2 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=rplB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 68/191 (35.60%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 99 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRH-PFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 +FR +DF + V I +DP R A +A V + +RY+ +A G+ G + G A + +GN LP+ IP G V N+E H+G G +AR +G +AVI + D D +KLPS + + C A IG+++ + KAG RN W PKVRGV MNPV+HP GG Sbjct: 61 KFRIIDFKRNKFGIPATVKTIEYDPNRSAFIALVCYADGEYRYI------LAPNGLKVGDKIESGPAAEIKLGNTLPLDKIPAGTNVHNIELHIGKGGQIARTAGSFAVISA--KDGDYVSLKLPSSEIRKVRKECLATIGELSNKDHNLVIIGKAG---------RNRWLGKRPKVRGVVMNPVDHPLGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_LEPBA (50S ribosomal protein L2 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=rplB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 68/191 (35.60%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 99 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRH-PFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 +FR +DF + V I +DP R A +A V + +RY+ +A G+ G + G A + +GN LP+ IP G V N+E H+G G +AR +G +AVI + D D +KLPS + + C A IG+++ + KAG RN W PKVRGV MNPV+HP GG Sbjct: 61 KFRIIDFKRNKFGIPATVKTIEYDPNRSAFIALVCYADGEYRYI------LAPNGLKVGDKIESGPAAEIKLGNTLPLDKIPAGTNVHNIELHIGKGGQIARTAGSFAVISA--KDGDYVSLKLPSSEIRKVRKECLATIGELSNKDHNLVIIGKAG---------RNRWLGKRPKVRGVVMNPVDHPLGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_GEOSM (50S ribosomal protein L2 OS=Geobacter sp. (strain M21) GN=rplB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 65/190 (34.21%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 99 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 ++R +DF + VA I +DP R A +A + + +K +A + G V ++A + GN LP+R IP G ++ N+E +G LAR++G +A +++ + +VKLPSG ++I C+A IGQV + KAG R+ W P VRGVAMNPV+HPHGG Sbjct: 61 KYRIIDFRRDKTEIPAKVATIEYDPCRSARIALLNYADG-----EKRYILAPLSLKVGDTVISSEQADIKPGNALPIRCIPLGTIIHNIELKIGKGAQLARSAGTFAQLMA--KEGKYGQVKLPSGEVRMILMDCKATIGQVGNVDHENVSIGKAG---------RSRWLGVRPHVRGVAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_CUPTR (50S ribosomal protein L2 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rplB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 72/211 (34.12%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF +++G + V + +DP R A +A V F ++ IA +GM GQ + G +A + GN LP+R+IP G + NVE G +ARA+G AV+++ + +V+L SG + + CRA +G+V + + + KAG R P VRGV MNPV+HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNDKDG-IPAKVERLEYDPNRSANIALVVFADG-----ERRYIIATKGMVAGQQLLNGSEAPIKAGNNLPIRNIPVGTTINNVEMLPGKGAQIARAAGGSAVLLAR--EGLYAQVRLRSGEVRRVHIECRATVGEVGNEEHSLRVIGKAGATRW-----RGIRPTVRGVVMNPVDHPHGG 235
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BACSU (50S ribosomal protein L2 OS=Bacillus subtilis GN=rplB PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 71/212 (33.49%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 39 QRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 ++ G + K H+ G Q+R +DF + G VA + +DP R A +A + + +K +A +G+ G + G +A + VGN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGG Sbjct: 39 KKGGRNNQGKLTVRHQGGGHKRQYRVIDFKRDKDGIPGRVATVEYDPNRSANIALINYADG-----EKRYILAPKGIQVGTEIMSGPEADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVL--GKEGKYVLVRLNSGEVRMILSACRASIGQV---GNEQHELINIGKA------GRSRWKGIRPTVRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_ACIC5 (50S ribosomal protein L2 OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=rplB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 78 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 HH G + R +DF + G VA I +DP R + +A +++ +K + G+ GQ + G +A ++VGN LP+++IP G V NVE G + R++G A +++ + D +KLPSG + + C A IGQV + KAG RN W P RGV MNPV+HPHGG Sbjct: 53 HHGGGHKKKLRLIDFKRDKFGVPGRVATIEYDPNRSSRIALISYADG-----EKRYILQPVGLKVGQTIMSGPEADILVGNALPLKNIPAGTTVHNVELRPGKGAQMVRSAGASAQLVA--KEGDYALLKLPSGETRRVLINCMATIGQVGNTDHENVSIGKAG---------RNRWKGIRPTNRGVTMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_PROWI (50S ribosomal protein L2, plastid OS=Prototheca wickerhamii GN=rpl2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 69/209 (33.01%), Postives = 106/209 (50.72%), Query Frame = 3 Query: 36 AQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 ++ +G + + T HR G + +R +DF +V I +DP R A +A V ++ +K ++ G+ G+ V A + VGN LP+ +IP G V NVE G G L R++G A I++ + + LPSG ++IP C A +G+V + L KAG + ++ +R P VRG AMNPV+HPHGG Sbjct: 38 SRAQGRNNKGRITTRHRGGGHKRLYREIDFIRNKIGTSAIVKSIEYDPNRTARIALVCYKDG-----EKRYILSPTGLKVGEMVIASPNAPITVGNTLPLYNIPLGTSVHNVELQPGAGGQLVRSAGSVAQIVA--KEGQWATLHLPSGEYRLIPQKCWATVGRVGNLDNSNITLGKAGRS--RWLSQR---PHVRGSAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_STAS1 (50S ribosomal protein L2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 71/212 (33.49%), Postives = 104/212 (49.06%), Query Frame = 3 Query: 33 RAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 RA R G + H H Q+R +DF + V I +DP R A +A + + +K IA + + GQ + G++A + VGN LP++ IP G V+ N+E G G +AR++G A ++ + ++L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGG Sbjct: 40 RAGRNNQGKLTVRH-HGGGHKRQYRVIDFKRNKDGINAKVDSIQYDPNRSANIALLVYADG-----EKRYIIAPKNLKVGQVLESGEEADIKVGNALPLQFIPVGTVIHNIELKPGKGGQIARSAGASAQVL--GKEGKYVLIRLRSGEVRMILSTCRATIGQV---GNIQHELVNVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_SOLUE (50S ribosomal protein L2 OS=Solibacter usitatus (strain Ellin6076) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 60/185 (32.43%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + VVA I +DP R + +A + + +K + +G+ G + G A +++GN LP+++IP G +V N+E G G +AR++G A ++S + +KLPSG + + C A +GQV L KAG + N RGV+MNPV+HPHGG Sbjct: 62 YRVVDFKRDKAGIPAVVAAIEYDPNRSSRIALLNYVDG-----EKRYILQPDGLKVGMKIMSGPNADILIGNALPLKNIPAGTIVHNIELKPGKGGQMARSAGSQAQLVSR--EGGLALLKLPSGEIRRVAVECMATVGQVGNVDHENVSLGKAGRKRWMGKTPHN-----RGVSMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_RICAH (50S ribosomal protein L2 OS=Rickettsia akari (strain Hartford) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 HR G + +R +DF + VV I +DP R A +A + + + +A + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ R L KAG RN W P VRGVAMNPV+HPHGG Sbjct: 53 HRGGGHKKLYRIIDFKRNKIDISAVVERIEYDPNRTAFIALIKYEDG-----EYSYILAPQKLSVGDRVMSSQDADIKIGNCLPLKFIPVGTTLHNVEMKVGKGGQIARSAGTSVDLV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDRKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGG 234 The following BLAST results are available for this feature:
BLAST of CF834719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834719 ID=CF834719; Name=CF834719; organism=Citrus sinensis; type=EST; length=656bpback to top |