CF834719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_RALME (50S ribosomal protein L2 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 73/211 (34.60%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF +++G + V + +DP R A +A V F ++ IA +GM GQ + G +A + GN LP+R+IP G + NVE G +ARA+G AV+++ + +V+L SG + + CRA IG+V + + + KAG R P VRGV MNPV+HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNDKDG-IAAKVERLEYDPNRSANIALVLFADG-----ERRYIIATKGMVAGQALMNGSEAPIKAGNNLPIRNIPVGTTINNVEILPGKGAQVARAAGGSAVLLAR--EGLYAQVRLRSGEVRRVHIECRATIGEVGNEEHSLRVIGKAGATRW-----RGIRPTVRGVVMNPVDHPHGG 235
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_MACCJ (50S ribosomal protein L2 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 73/212 (34.43%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 39 QRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 ++ G + K HR G Q+R +DF + VA I +DP R A +A + + +K IA +G+ G V G +A + VGN LP+++IP G V+ N+E G G L R++G A ++ + V+L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGG Sbjct: 39 RKAGRNNQGKLTVRHRGGGHKRQYRIIDFKRNKDGIPAKVATIEYDPNRSANIALLHYLDG-----EKRYIIAPKGLTVGTQVVNGPEADIKVGNCLPLQNIPVGTVIHNIELKPGKGGQLVRSAGASAQVL--GKEGKYVLVRLKSGEVRMILSTCRATIGQV---GNEQHELINIGKA------GRSRWKGIRPTVRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_EHRCJ (50S ribosomal protein L2 OS=Ehrlichia canis (strain Jake) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 68/189 (35.98%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 +R +DF + V + +DP R A +A +++ +K IA G+ G V G+ + ++ GN L ++SIP G V NVE G+ GV+AR++G YA ++S D ++L SG + + S CRA IG V+ L KAG RN W P VRGVAMNP++HPHGG Sbjct: 62 YRIIDFKRNKVGVSATVERLEYDPNRTAFIALLSYDDG-----EKSYIIAPNGLKKGDVVISGEGSDILPGNCLMLKSIPVGTFVHNVELRPGNGGVIARSAGTYAQLMS--KDGVYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKAG---------RNRWLGIRPTVRGVAMNPIDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_DESRM (50S ribosomal protein L2 OS=Desulfotomaculum reducens (strain MI-1) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 63/185 (34.05%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 FR +DF + VA I +DP R A +A + + +K +A G+ G V G A + VGN LP+R+IP G +V N+E + G + R++G A +++ + ++LPSG +++ CRA IGQV + KAG + H P VRG MNPV+HPHGG Sbjct: 62 FRIIDFKRNKDGIPAKVASIEYDPNRSARIALLNYADG-----EKRYILAPVGLEVGVIVESGPDADIKVGNCLPLRNIPVGTMVHNIELYPGAGAQMVRSAGAAAQLMA--KEGKYANLRLPSGEMRLVLQECRATIGQVGNLEHENVTIGKAGRSRH-----LGIRPTVRGKVMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BACLD (50S ribosomal protein L2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 71/212 (33.49%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 39 QRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 ++ G + K H+ G Q+R +DF + G VA + +DP R A +A + + +K +A +G+ G + G +A + VGN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGG Sbjct: 39 KKGGRNNQGKLTVRHQGGGHKRQYRIIDFKRDKDGIPGRVATVEYDPNRSANIALINYVDG-----EKRYILAPKGLQVGTEIMSGPEADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVL--GKEGKYVLVRLNSGEVRMILSACRATIGQV---GNEQHELINIGKA------GRSRWKGVRPTVRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BACA2 (50S ribosomal protein L2 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 71/212 (33.49%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 39 QRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 ++ G + K H+ G Q+R +DF + G VA + +DP R A +A + + +K +A +G+ G + G +A + VGN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGG Sbjct: 39 KKGGRNNQGKLTVRHQGGGHKRQYRVIDFKRDKDGIPGRVATVEYDPNRSANIALINYVDG-----EKRYILAPKGIQVGTEIMSGPEADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVL--GKEGKYVLVRLNSGEVRMILSACRASIGQV---GNEQHELINVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_ALKMQ (50S ribosomal protein L2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 66/199 (33.17%), Postives = 102/199 (51.26%), Query Frame = 3 Query: 66 KSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 K HR G + +R +DF + VA + +DP R A +A + + +K IA +G+ G+ ++ G ++ + VGN LP+ +IP G ++ N+E G G +AR++G+ A +++ + V+LPSG + I CRA IGQV + KAG + K P VRG AMNP +HPHGG Sbjct: 48 KITVRHRGGGLKRHYRIIDFKRNKDDIPAKVASVEYDPNRTANIALLHYVDG-----EKRYIIAPKGLKVGEMIFSGPESDIKVGNALPLINIPVGTIIHNIEMKPGKGGQIARSAGNSAQLMA--KEGRYALVRLPSGEVRQILIECRATIGQVGNLDHENVTIGKAGR-----KRKMGIRPTVRGSAMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_PANGI (50S ribosomal protein L2, chloroplastic OS=Panax ginseng GN=rpl2-A PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 65/194 (33.51%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HPHGG Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS--KRWLGKR---PVVRGVVMNPVDHPHGG 232
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_ANTFO (50S ribosomal protein L2, chloroplastic OS=Anthoceros formosae GN=rpl2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 67/196 (34.18%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 75 THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 + HR G + +R +DF + G +A I +DP R + + +K+ + +GM G V +A + +GN LP+ ++P G + NVE G G LARA+G A II+ + ++LPSG ++I C A IGQV + + KAG+ ++ KR PKVRGV MNP++HPHGG Sbjct: 51 SRHRGGGHKRIYRKIDFLRDKKDIFGRIATIEYDPNRNTFICLTYYEDG-----EKKYILYPQGMRIGDSVVSSTEAPISIGNALPLTNMPLGTAIHNVEITPGKGGQLARAAGAVAKIIA--KEGRLATLRLPSGEVRLISQKCLATIGQVGNSDANNRTIGKAGS--KRWLGKR---PKVRGVVMNPIDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_SHEB9 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS195) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTANIALVLYADG-----ERRYILAAKGMQAGDKIQSGVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGIRPTVRGVAMNPVDHPHGG 234 The following BLAST results are available for this feature:
BLAST of CF834719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834719 ID=CF834719; Name=CF834719; organism=Citrus sinensis; type=EST; length=656bpback to top |