CF834719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_LACDB (50S ribosomal protein L2 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 75/221 (33.94%), Postives = 110/221 (49.77%), Query Frame = 3 Query: 9 SKEMGRVIRAQRKGAGSVFKSH--THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 SK ++ ++ K AG H HR G Q+R +DF +K + I +DP R A +A + + K +A +G+ G +V G A + VGN LP+++IP G V N+E G G +AR++G A ++ D T+V+L SG + I S CRA IG V G + L+ G A ++ KR P+ RG MNP +HPHGG Sbjct: 27 SKPEKTLLASKSKTAGRNSYGHITVRHRGGGHKQQYRIIDFKRTKDNVKAKIVAIEYDPNRSANIALLHYTDG-----TKAYILAPKGLTVGSWVESGVDADIKVGNALPLKNIPTGTEVHNIELKPGKGGQIARSAGTSAQVL--GVDGKYTQVRLQSGEVREILSECRATIGAV---GNEQHSLINIGKAGRSRWMGKR---PQSRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_LACDA (50S ribosomal protein L2 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 75/221 (33.94%), Postives = 110/221 (49.77%), Query Frame = 3 Query: 9 SKEMGRVIRAQRKGAGSVFKSH--THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 SK ++ ++ K AG H HR G Q+R +DF +K + I +DP R A +A + + K +A +G+ G +V G A + VGN LP+++IP G V N+E G G +AR++G A ++ D T+V+L SG + I S CRA IG V G + L+ G A ++ KR P+ RG MNP +HPHGG Sbjct: 27 SKPEKTLLASKSKTAGRNSYGHITVRHRGGGHKQQYRIIDFKRTKDNVKAKIVAIEYDPNRSANIALLHYTDG-----TKAYILAPKGLTVGSWVESGVDADIKVGNALPLKNIPTGTEVHNIELKPGKGGQIARSAGTSAQVL--GVDGKYTQVRLQSGEVREILSECRATIGAV---GNEQHSLINIGKAGRSRWMGKR---PQSRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BURPP (50S ribosomal protein L2 OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF + V + +DP R A +A V + +++ IA +G+ GQ + G +A + GN LP+R+IP G + +E G +AR++G A++++ + +V+L SG + + CRA IG+V + + + KAG N + R P VRGVAMNPV+HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFRRNKDGIAAKVERLEYDPNRSANIALVLYADG-----ERKYIIAPKGLTVGQQLMSGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLAR--EGIYAQVRLRSGEIRRVHVECRATIGEVGNEEHSLRQIGKAGANRWRGIR------PTVRGVAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BURP8 (50S ribosomal protein L2 OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 68/210 (32.38%), Postives = 105/210 (50.00%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF + V + +DP R A +A V + ++ IA +G+ GQ + G +A + GN LP+R+IP G + +E G +AR++G A++++ + +V+L SG + + CRA IG+V + + + KAG N + R P VRGVAMNPV+HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRIVDFRRTKDGIPAKVERLEYDPNRSANIALVVYADG-----ERRYIIAPKGVTVGQQLMSGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLAR--EGTYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIR------PTVRGVAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BUCAT (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 61/185 (32.97%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BUCAI (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 61/185 (32.97%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BUCA5 (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 61/185 (32.97%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + V +DP R + +A + ++ +++ +A +G+ G + G +A + GN LP+++IP G V NVE G G +AR++G Y +++ D + ++L SG + S CRA IG+V K L KAG A ++ P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDG-----ERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAF--DEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_BLOFL (50S ribosomal protein L2 OS=Blochmannia floridanus GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 61/186 (32.80%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 99 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 ++R +DF + VV + +DP R A +A + ++ ++ +A + G + G + GN LP+ +IP G+++ NVE VG G LAR++G Y I+S D + ++L SG + + CRA IG+V + L KAG + R P VRG AMNP++HPHGG Sbjct: 63 RYRIIDFKRNKDDVFAVVERMEYDPNRSANIALIVYKDG-----ERRYILAPRNLNVGNKIISGLNVPISPGNSLPLSNIPVGSIIHNVEMKVGKGGQLARSAGTYVQIVSR--DGEYIILRLRSGEIRKVRCECRATIGEVGNNEHMLRALGKAGASRW-----RGIRPTVRGTAMNPIDHPHGG 236
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_ACIAD (50S ribosomal protein L2 OS=Acinetobacter sp. (strain ADP1) GN=rplB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 71/219 (32.42%), Postives = 107/219 (48.86%), Query Frame = 3 Query: 12 KEMGRVIRAQRKGAGSVFKSH--THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 K ++ A+++ G H T H G +R +DF + VV I +DP R A +A + + ++ IA +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D V+L SG + I CRA+IG+V+ + L KAG + R P VRG+AMNPV+HPHGG Sbjct: 28 KPFAALVEAKKRTGGRNNNGHITTRHVGGGHKQHYRLVDFKRNKDGIPAVVERIEYDPNRTAHIALLKYADG-----ERRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGTSVQLLGR--DGSYAIVRLRSGEMRKIHVECRAVIGEVSNQENNLRSLGKAGASRW-----RGVRPTVRGMAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_ILLOL (50S ribosomal protein L2, chloroplastic OS=Illicium oligandrum GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 64/200 (32.00%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 75 THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 T HR G + +R ++F + G + I +DP R A + + + +K + G G + G + + +GN LP+ + G + N+E +G G LARA+G A +I+ + T R LPSG +++ C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGG Sbjct: 51 TGHRGGGHKRLYRKINFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGARIGDTIVSGTEVPISMGNALPLTDMSLGTAIHNIEITLGKGGQLARAAGTVAKLIAKEGKSATLR--LPSGEVRLVSKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 234 The following BLAST results are available for this feature:
BLAST of CF834719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834719 ID=CF834719; Name=CF834719; organism=Citrus sinensis; type=EST; length=656bpback to top |