CF834719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_MESFL (50S ribosomal protein L2 OS=Mesoplasma florum GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 66/200 (33.00%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 75 THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 T H+ G ++R +DF + G +A I +DP R A + V + +K + A+GM G + + A + VGN P+++IPEG ++ NVE G G +AR++G I+ + D ++L SG + + + C A IG+V G E L+ G A RN W P VRG MNP +HPHGG Sbjct: 52 TRHKGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLDG-----EKRYILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVLADCYATIGEV---GNEEYNLVNWGKA------GRNRWRGIRPTVRGSVMNPNDHPHGG 237
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_EHRCR (50S ribosomal protein L2 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 73/215 (33.95%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 24 RVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 ++ R R G + H R +R +DF + V + +DP R A +A +++ +K IA G+ G V G A ++ GN L ++SIP G V NVE G+ GV+AR++G YA ++S D ++L SG + + S CRA IG V+ L KAG R+ W P VRGVAMNP++HPHGG Sbjct: 37 KISRGGRNSRGVITVRH-RGRGHKRLYRVVDFKRNKVGVSATVERLEYDPNRTAFIALLSYDDG-----EKSYIIAPNGLKKGDVVISGDGADILPGNCLLLKSIPVGTFVHNVELRPGNGGVIARSAGTYAQLMS--KDGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKAG---------RSRWLGIRPTVRGVAMNPIDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_CLOTE (50S ribosomal protein L2 OS=Clostridium tetani GN=rplB PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 69/205 (33.66%), Postives = 99/205 (48.29%), Query Frame = 3 Query: 48 GAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 G S K HR G A+ +R +DF + VA I +DP R A +A V + +K IA +G+ G + G A + GN LP+++IP G V N+E G L R++G A +++ + + +KLPSG + + CRA IG V+ + KAG + K P VRG AMNP +HPHGG Sbjct: 42 GRNSQGKITVRHRGGGAKRKYRIIDFKRDKDGIPAKVATIEYDPNRTAFIALVVYTDG-----EKRYIIAPQGLKVGDVIVSGPDADIKAGNCLPIKNIPVGTFVHNIELASGKGAQLVRSAGGSAQLMA--KEGNYATIKLPSGETRYVRIECRATIGTVSNVKHEIMSIGKAGR-----KRKMGFRPTVRGSAMNPCDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_ACIBL (50S ribosomal protein L2 OS=Acidobacteria bacterium (strain Ellin345) GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 72/212 (33.96%), Postives = 102/212 (48.11%), Query Frame = 3 Query: 42 RKGAGSVFKSHT---HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 656 R+ AG + H H RK R +DF + VA + +DP R A +A + + +K + G+ GQ V G A ++VGN LP+R+IP G VV N+E G +AR++G A +++ ++D +KLPSG + + C A IGQV + KAG R W P RGV MNPV+HPHGG Sbjct: 43 RRNAGDITIWHRGGGHKRK----LRLIDFKRDKSGVPATVATVEYDPNRSANIALLHYADG-----EKRYILHPVGLKVGQKVVSGPDADILVGNALPLRNIPAGTVVHNIELKPGKGAQMARSAGAQAQLVA--KESDYALLKLPSGETRRVLVDCMATIGQVGNLDYENVAIGKAG---------RTRWMGVRPTNRGVVMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_ACIAC (50S ribosomal protein L2 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rplB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 70/211 (33.18%), Postives = 104/211 (49.29%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF + V I +DP R A +A V + ++ IA + G + G +A + VGN LP+R+IP G+ + +E G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGVAMNP++HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNKDAIPAKVERIEYDPNRTAHIALVCYADG-----ERRYIIAPRNLEVGATIVSGSEAPIRVGNTLPIRNIPVGSTIHCIELKPGAGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAG-------VKRWMGIRPTVRGVAMNPIDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_PEA (50S ribosomal protein L2, chloroplastic OS=Pisum sativum GN=rpl2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 65/194 (33.51%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 HR G + +R +DF + G + I +DP R A + + Y ++ +I G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L + G ++R KR P VRGV MNPV+HPHGG Sbjct: 51 HRGGGHKRLYRKIDFRRNEKDIYGRIITIEYDPNRNAHICLI------HYGDGEKRYILHPKAIIGDTIVYGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRVG--AKRWRGKR---PVVRGVVMNPVDHPHGG 231
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_OENPA (50S ribosomal protein L2, chloroplastic OS=Oenothera parviflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HPHGG Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_OENGL (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HPHGG Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_OENEH (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl2-A PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HPHGG Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RK2_OENBI (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3 Query: 81 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 HR G + +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ ++ KR P VRGV MNPV+HPHGG Sbjct: 51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231 The following BLAST results are available for this feature:
BLAST of CF834719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834719 ID=CF834719; Name=CF834719; organism=Citrus sinensis; type=EST; length=656bpback to top |