CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB1 (Chaperone protein htpG OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ Y++KEIFLRELISNSSDA+DKI +++LTD S    +   +I ++ DK N  L I D+GIGMTK +L NNLG IA+SG+ +F
Sbjct:   19 NSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDNYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQF 102          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CITK8 (Chaperone protein htpG OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19
Identity = 44/90 (48.89%), Postives = 68/90 (75.56%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GM + D++++LGTIA+SGTK F+E++ +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTIADNGVGMNRDDVIDHLGTIAKSGTKSFLESMGS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 697
            ++ YS  +IFLRELISN+SDALDK+R+ES+   + ++A     I I+P K  ++L++ID+GIGM + +L++NLGTIA+SGTK F+  L    D
Sbjct:   26 HSVYSETDIFLRELISNASDALDKLRYESIATPALMEAGGAPKIQIVPRKAPDTLTVIDNGIGMNRQELIDNLGTIAKSGTKSFLTKLTEAKD 118          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_POLSJ (Chaperone protein htpG OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 45/89 (50.56%), Postives = 68/89 (76.40%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSN +IFLRELISN+SDA DK+RFE+L D +  +   EL + +  +KT N+L+I D+GIG+++ + + NLGTIA+SGT++FM  L+
Sbjct:   21 HSLYSNPDIFLRELISNASDACDKLRFEALNDAALYEGDSELQVRLRYNKTANTLTITDNGIGLSEREAIENLGTIAKSGTRDFMAKLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_NATTJ (Chaperone protein htpG OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEA 679
            N+ YSNKEIFLRELISN+SDA+DK+ ++SLTD S    + + +I I  DK N  L I D+GIGMT+ +L +N+G IARSG+ +F +A
Sbjct:   19 NSIYSNKEIFLRELISNASDAIDKLYYKSLTDNSLDFNKDDYYIKITVDKENRQLKISDTGIGMTRQELEDNIGVIARSGSLDFKKA 105          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLREL+SN+SDA DK+RFE++     LD   EL I +  DK   +++I D+GIG+++ + V NLGTIARSGT+EF   L
Sbjct:   28 HSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQL 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLREL+SN+SDA DK+RFE++     LD   EL I +  DK   +++I D+GIG+++ + V NLGTIARSGT+EF   L
Sbjct:   28 HSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQL 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 44/90 (48.89%), Postives = 68/90 (75.56%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L+     +   EL + +  DK   +L++ D+GIGM++ ++++NLGTIA+SGTK F+E++ +
Sbjct:   24 HSLYSNKEIFLRELISNASDAADKLRFRALSHPELFEGDGELRVRLSFDKEKRTLTLSDNGIGMSREEVIDNLGTIAKSGTKAFLESIGS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 45/93 (48.39%), Postives = 68/93 (73.12%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 697
            ++ YSNKEIFLREL+SN++DA DK+R+ +LTD +  +   EL + +  DK   +++I D+GIGMT+  ++ +LGTIA+SGTKEF   L+  A+
Sbjct:   22 HSLYSNKEIFLRELVSNAADAADKLRYLALTDDALYEGDGELRVRVSTDKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFNNLSGEAN 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MARAV (Chaperone protein htpG OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA DK+RF +L D    +   +L I +  DK   +++I D+GIGMT+ D++ NLGTIA+SGT EF++ L+
Sbjct:   25 HSLYSNKEIFLRELISNASDAEDKLRFAALKDDKLFEGDSDLKIRLDYDKDAGTITIADNGIGMTRDDVIANLGTIAKSGTAEFLKQLS 113          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_CLOB11.712e-1955.95Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CITK81.712e-1948.89Chaperone protein htpG OS=Citrobacter koseri (stra... [more]
HTPG_RHOPS2.236e-1949.46Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_POLSJ2.236e-1950.56Chaperone protein htpG OS=Polaromonas sp. (strain ... [more]
HTPG_NATTJ2.236e-1955.17Chaperone protein htpG OS=Natranaerobius thermophi... [more]
HTPG_BORPA2.236e-1953.41Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_BORBR2.236e-1953.41Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_YERE82.920e-1948.89Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_SHEDO2.920e-1948.39Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_MARAV2.920e-1952.81Chaperone protein htpG OS=Marinobacter aquaeolei (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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