CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA DK+RFE++ + +  +  P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELISNASDAADKLRFEAIENSALYENDPNLRIRVSYDKDARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFGKLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SERP5 (Chaperone protein htpG OS=Serratia proteamaculans (strain 568) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 45/90 (50.00%), Postives = 66/90 (73.33%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L+     +   EL + +  DK   +L+I D+GIGM + +++ NLGTIA+SGTK F+E++ +
Sbjct:   24 HSLYSNKEIFLRELISNASDAADKLRFRALSAPELYEGDGELRVRLSFDKDQRTLTIADNGIGMNREEVIENLGTIAKSGTKAFLESIGS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SALPA (Chaperone protein htpG OS=Salmonella paratyphi A GN=htpG PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 43/90 (47.78%), Postives = 68/90 (75.56%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GM + +++++LGTIA+SGTK F+E++ +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDSELRVRVSFDKDKRTLTIADNGVGMNRDEVIDHLGTIAKSGTKSFLESMGS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 697
            ++ YS  +IFLRELISN+SDALDK+R+ES+ + + +    E  I I+P K  ++L++ID+GIGM + +L++NLGTIA+SGTK F+  L    D
Sbjct:   26 HSVYSETDIFLRELISNASDALDKLRYESIANPALMADGGEPKIRIVPKKAPDTLTVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKD 118          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_PSEU2 (Chaperone protein htpG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=htpG PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 46/89 (51.69%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:   25 HSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 46/89 (51.69%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:   25 HSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ENTS8 (Chaperone protein htpG OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 44/90 (48.89%), Postives = 68/90 (75.56%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L+     +   +L + +  DK   +L+I D+GIGMT+ +++++LGTIA+SGTK F+E++ +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSSPDLYEGDGDLRVRVSFDKDKRTLTIADNGIGMTRDEVIDHLGTIAKSGTKAFLESMGS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCR (Chaperone protein htpG OS=Ehrlichia chaffeensis (strain Arkansas) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 45/91 (49.45%), Postives = 67/91 (73.63%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG 691
            ++ Y+NK+IFLREL+SN+SDA DK+R+ESL+++  +D   +  I I  D+  N L I D+GIGM + DL++NLGTIA SGT+ F++ +  G
Sbjct:   25 HSLYTNKDIFLRELVSNASDACDKLRYESLSNQDLIDQDSDFKIVISVDQDKNRLYISDNGIGMNRQDLIDNLGTIAHSGTQRFLDEINNG 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CLOTE (Chaperone protein htpG OS=Clostridium tetani GN=htpG PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 49/96 (51.04%), Postives = 70/96 (72.92%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA--GADV 700
            N+ Y+NKEIFLRELISN+SDA+DK  + SLTD++    + + +I IIP+K   +L+IID+GIGM+  +L NNLGTIA+SG+  F   + +  G D+
Sbjct:   19 NSIYTNKEIFLRELISNASDAIDKRYYRSLTDENISFNKKDFYIRIIPNKEERTLTIIDTGIGMSVEELENNLGTIAKSGSLAFKNKMESKEGIDI 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 48/84 (57.14%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ Y+NKEIFLRELISN+SDA+DK  + SL D +    + + +I I  DK N +L+I D+GIGMTK DL NNLGTIA+SG+  F
Sbjct:   19 NSIYTNKEIFLRELISNASDAIDKCYYRSLVDTNITFNKDDFYIRISADKENKTLTITDTGIGMTKDDLENNLGTIAKSGSFAF 102          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_BURXL2.920e-1952.81Chaperone protein htpG OS=Burkholderia xenovorans ... [more]
HTPG_SERP53.814e-1950.00Chaperone protein htpG OS=Serratia proteamaculans ... [more]
HTPG_SALPA3.814e-1947.78Chaperone protein htpG OS=Salmonella paratyphi A G... [more]
HTPG_RHOP23.814e-1949.46Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_PSEU23.814e-1951.69Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSE143.814e-1951.69Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_ENTS83.814e-1948.89Chaperone protein htpG OS=Enterobacter sakazakii (... [more]
HTPG_EHRCR3.814e-1949.45Chaperone protein htpG OS=Ehrlichia chaffeensis (s... [more]
HTPG_CLOTE3.814e-1951.04Chaperone protein htpG OS=Clostridium tetani GN=ht... [more]
HTPG_CLOAB3.814e-1957.14Chaperone protein htpG OS=Clostridium acetobutylic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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