CF834729

Overview
NameCF834729
Unique NameCF834729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22
Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 3
Query:  108 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENLGIND--EVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLA-ENGVVKVLNLEEGGAFTFSGAEDMLKAL 515
            +S     KK ++ +VPGAFTP C+++HLPG+++    + SKGVD V  I+ ND FV+K WK+ LG  D  +++ +SD N   TK +G  +DLS   +GLG RS R AL+   +G+V+   +E GG    S A+ ++  L
Sbjct:   31 LSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSS--IGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: YRP2_RHIET (Putative peroxiredoxin in rpoN2 3'region OS=Rhizobium etli PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22
Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 3
Query:  105 TVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG 470
            T  D  S K+ ILF++PGAFTP CS   LP F     E K  G+D + C+SVNDAFVM AW ++ G+ + V L+ DG+G FT+ +G  + ++   +G G+RS RYA +  NGVV+    EEG
Sbjct:   33 TTDDYFSGKRVILFSLPGAFTPICSTFQLPDFESLYVEFKKNGIDDIYCLSVNDAFVMNAWGKSQGLKN-VKLIPDGSGEFTRKMG--MLVAKDNLGFGLRSWRYAAVINNGVVEGWFEEEG 151          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: PMP20_EMENI (Putative peroxiredoxin pmp20 OS=Emericella nidulans GN=AN8692 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22
Identity = 57/133 (42.86%), Postives = 85/133 (63.91%), Query Frame = 3
Query:  123 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG-GAFTFSGAEDMLKAL 515
            ++KK ILFA+PGAFTP CS +H+P ++E+  E+++KGVD VA ++ NDAFVM AW +  G+ ND++L LSD    F+K+IG   +          R++RYA++ ++G V    LE       FS AE ++K L
Sbjct:   44 ADKKVILFALPGAFTPVCSARHVPEYIERLPEIRAKGVDVVAVLAYNDAFVMSAWGKANGVKNDDILFLSDPEAKFSKSIGWADEEG--------RTKRYAIVLDHGKVTYAALEPAKNHLEFSSAETVIKHL 168          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 3
Query:   84 AVELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGA-FTFSGAEDML 506
            A    T  + D+   KK ++F +PGA+T  CSQ H+P +     +LK+KGVD+V C+SVND + +  W E L   D +    D +G F K++  E+DLS     LG RS R++   ++G +K  N+E   + F  SGAE +L
Sbjct:   56 ATNFSTTPLKDIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLS--AALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVIL 195          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: PMP20_ASPFU (Putative peroxiredoxin pmp20 OS=Aspergillus fumigatus GN=pmp20 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22
Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  123 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAW-KENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG-GAFTFSGAEDMLKAL 515
            ++KK ILFA+PGAFTP CS +H+P ++EK  E+++KGVD VA ++ NDA+VM AW K N    D++L LSD +  F+K+IG   +          R++RYAL+ ++G +    LE       FS AE +LK L
Sbjct:   44 ADKKVILFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGKANQVTGDDILFLSDPDARFSKSIGWADEEG--------RTKRYALVIDHGKITYAALEPAKNHLEFSSAETVLKHL 168          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: Y4VD_RHISN (Putative peroxiredoxin y4vD OS=Rhizobium sp. (strain NGR234) GN=NGR_a01200 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 3
Query:  105 TVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG 470
            T  D  S K+ +LF++PGAFTPTCS + LP F     E    G++ V C+SVNDAFVM AW + LG+ ++V L+ DG+G FT+ +G  + ++   +G G+RS RYA +  + VV+    EEG
Sbjct:   33 TTEDYFSGKRVVLFSLPGAFTPTCSTQQLPDFERLYDEFGKVGIEAVYCLSVNDAFVMNAWGKALGL-EKVRLIPDGSGEFTRKMG--MLVAKDNLGFGMRSWRYAAVVNDSVVEQWFEEEG 151          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 3
Query:   30 AISVGH*LPDATLSYFDSAVELQ---------TITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG 470
            A + G+ +PD  + Y     EL          T    D    KK ++ ++PGA+TP C Q+H+P  V++  ELK+KGVD V  I+ ND FVM AW       D+V+  +D +  F+KA+G  +DLS K    G R+ RYAL+ ++  +     +EG
Sbjct:    7 ATAKGNEIPDTLMGYIPWTPELDSGEVCGIPTTFKTRDEWKGKKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAK--HFGERTARYALIIDDNKIVDFASDEG 160          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: PMP20_SCHPO (Putative peroxiredoxin pmp20 OS=Schizosaccharomyces pombe GN=pmp20 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 3
Query:   33 ISVGH*LPDATLSYFDSAVELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTVACISVNDAFVMKAWKENL--GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLG-VRSRRYALLAENG-VVKVLNLEEGGAFTFSGAEDMLKAL 515
            ++VG  LP  TL       E +   V +  S  K I+  VPGAFTP CS + +PG++    +  +KG+  +  ++VND FV KAWK++   G    V  ++D NG FTKA     D S     LG +RS+RYA + ENG VVKV    E      S A+ +L +L
Sbjct:    2 VAVGSTLPKVTLW------ENKPEEVVEFPSQGKFIIVGVPGAFTPPCSSQ-VPGYIANEKQFAAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGL---LGPLRSKRYAAVVENGKVVKVFIENEVTDVDISSADKVLSSL 156          
BLAST of CF834729 vs. ExPASy Swiss-Prot
Match: AHP1_YEAST (Peroxiredoxin type-2 OS=Saccharomyces cerevisiae GN=AHP1 PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 3
Query:   96 QTITVSDLTS-NKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL-KSKGVDTVACISVNDAFVMKAWKENLGIND--EVLLLSDGNGVFTKAIGCELDLSDKPMGLGVR-SRRYALLAENGVVKVLNLE--EGGAFTFSGAEDMLKAL 515
            QT+  S L S NKK I+   P AF+PTC+  H+PG++    EL K K VD V  ++V++ F  +AW ++LG+ D   +   SD    FTK+IG EL + D     GV  S R+A++ ENG+V     E   G   T S  E +L  L
Sbjct:   35 QTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGD-----GVYWSGRWAMVVENGIVTYAAKETNPGTDVTVSSVESVLAHL 176          
The following BLAST results are available for this feature:
BLAST of CF834729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PMPB_CANBO1.682e-2241.01Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
YRP2_RHIET3.747e-2245.90Putative peroxiredoxin in rpoN2 3'region OS=Rhizob... [more]
PMP20_EMENI3.747e-2242.86Putative peroxiredoxin pmp20 OS=Emericella nidulan... [more]
PRX2F_ORYSJ6.391e-2238.03Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]
PMP20_ASPFU6.391e-2243.61Putative peroxiredoxin pmp20 OS=Aspergillus fumiga... [more]
Y4VD_RHISN3.172e-2144.26Putative peroxiredoxin y4vD OS=Rhizobium sp. (stra... [more]
MALF2_MALFU4.580e-2035.90Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]
PMP20_SCHPO3.629e-1738.18Putative peroxiredoxin pmp20 OS=Schizosaccharomyce... [more]
AHP1_YEAST5.240e-1639.46Peroxiredoxin type-2 OS=Saccharomyces cerevisiae G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834729 ID=CF834729; Name=CF834729; organism=Citrus sinensis; type=EST; length=710bp
CTCTCCACCAAGCCACGCCAGTCTCCGCCGCCATTTCCGTGGGCCATTAA
CTCCCCGACGCCACCCTCTCCTACTTCGACTCCGCCGTCGAGCTCCAGAC
CATCACCGTCTCCGACCTCACCTCCAATAAAAAAGCAATCCTATTCGCCG
TCCCCGGCGCCTTCACCCCCACCTGCTCCCAAAAACACCTCCCGGGCTTC
GTCGAGAAATCCGCCGAGTTGAAATCCAAAGGCGTCGACACTGTCGCCTG
CATTTCCGTGAACGACGCCTTCGTTATGAAGGCCTGGAAGGAGAATCTTG
GAATCAACGATGAAGTGCTTTTGTTGTCTGATGGGAACGGGGTGTTCACT
AAGGCTATTGGCTGTGAGCTCGACTTGAGTGACAAGCCCATGGGATTGGG
AGTTAGGTCCAGGAGGTACGCCCTTTTGGCAGAAAACGGCGTCGTTAAGG
TGCTCAATTTGGAGGAGGGCGGCGCCTTTACTTTCAGCGGAGCTGAGGAC
ATGCTCAAAGCTCTGTGATTTCGGTGAGATAGTTTTTTTTTTTTTAATAA
TTTAACTTTCATTAGAGTGTTGAATAATGTGTCTTTGTTACTAAAAACTC
GTGTTTCGGGTTTTGAAATTTCTACTTCTCCTTGTGCATTTGAATTTTCA
GAGCTGTTTGGATTTTTATCCTGCTCAATTTAATTTTTTATCCCAAAAAA
AAAAAAAAAA
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