CF834732

Overview
NameCF834732
Unique NameCF834732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4220 contig Csv1_Contig4220:170..852. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.078e-67
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 3
Query:   72 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQS-EVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            +FP+I++  L G +R A M ++ DACENWG +EL+NHGISHEL++ V+ + KEHY +  +QRFK+  ASK L+ V++ E  +LDWESTFFLRHLP SN+++IPDL+DD R  MKEFA+ELE +A                  KKVF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD+VSGLQLLKD +W+DV
Sbjct:    5 SFPVINMELLQGSQRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEF-ASKTLDTVENVEPENLDWESTFFLRHLPTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDV 210          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.683e-66
Identity = 124/207 (59.90%), Postives = 152/207 (73.43%), Query Frame = 3
Query:   75 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVND---LDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            FP+I++  L G+ER A ME ++DACENWGFFE++NHGIS EL+D V+++TK+HY +  +QRF +  ASK L+    +VN    LDWESTFF+RHLP SN+A+IPDL+DDYR+ MK FA ELE +A                   K F G  G PTFGTKVS+YPPCP+PDL+KGLRAHTDAGGIILLFQDD V GLQLLKD +WVDV
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEF-ASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDV 212          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.945e-65
Identity = 123/207 (59.42%), Postives = 152/207 (73.43%), Query Frame = 3
Query:   75 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVND---LDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            FP+I++  L G+ER A ME ++DACENWGFFE++NHGIS EL+D V+++TK+HY +  +QRF +  ASK L+    +VN    LDWESTFF+RHLP SN+A+IPDL+DDYR+ MK FA ELE +A                   K F G  G PTFGTKVS+YPPCP+PDL++GLRAHTDAGGIILLFQDD V GLQLLKD +WVDV
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEF-ASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDV 212          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.763e-58
Identity = 113/201 (56.22%), Postives = 138/201 (68.66%), Query Frame = 3
Query:   99 LNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYG----KCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            L G  RS  M ++ DACENWGFFEL+NHGISHE  +  + + KEHY     +  +QRFK+  A         + ++LDWESTFFLRHLP SN++++PDL++D    MKEFA+ LEK+A                  K+VF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD VSGLQLLKD++W+DV
Sbjct:    4 LEGSRRSDAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDV 204          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.190e-44
Identity = 95/209 (45.45%), Postives = 130/209 (62.20%), Query Frame = 3
Query:   78 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK-----QMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            P+ID SKL+G ER+ TM  I + CE WGFF+LVNHGI  ELL+ V++++ E Y K  ++RF+     Q++ +   E     ++++DWE  F L+     +  E P    D+ + MKE+  E+ K+A                  KK F G     P FGTKVS+YPPCP+ DL+KGLRAHTDAGG+ILLFQDD+V GLQ+LKD +W+DV
Sbjct:    4 PVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECY-KLREERFEGSKPVQLLDTLVKEGDGQRLDNVDWEDVFVLQ-----DDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDV 206          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22
Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 3
Query:   78 PIIDLSKL-NGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK-----QMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAE--IPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            PIID+ +L +     + +E ++ AC+ WGFF+LVNHGI    LD V+   ++ +   M+++ K       +   G   V SE   LDW   FF    PV        P L   +R  ++ ++ E++ VA                  +K+F          +++ YPPCP+PD + GL  H+D+ G+ +L Q ++V GLQ+ KD +WV V
Sbjct:   54 PIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLF-DDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPV 262          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.544e-20
Identity = 65/213 (30.52%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   78 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLEAVQSEVNDLD--------WESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            P+ID+S ++ DE     E++ +A + WG F+++NHGI  E+++ +Q++ KE + + + Q  K+++A K G ++++     L         W    F +  P S  N    P     YR+A +E+A  L KVA                   +   GS+   +  K++ YPPCP+PDL  G+ AHTD   I LL  ++    +Q+ KD  W DV
Sbjct:   58 PVIDISNVDDDEEKLVKEIV-EASKEWGIFQVINHGIPDEVIENLQKVGKEFFEE-VPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAA-GSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE----VQVFKDGHWYDV 263          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20
Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 3
Query:   78 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVAS-KGLEAVQSEVNDLD--------WESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            P+IDL   N  E +  +E+I +A   WG F++VNHGI  + +  +Q++ KE +   + Q+ K+++A  +G + V+     L         W    F    P S  N    P+    YR+A +E+AV L  V                   KK   G     +  K++ YPPCP+PDL  G+ AHTD   I +L   +EV GLQ+ KDD W DV
Sbjct:   44 PVIDLGSSNNTEENL-VELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFE--LPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKAS-GGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILV-PNEVQGLQVHKDDHWYDV 251          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.751e-19
Identity = 62/209 (29.67%), Postives = 106/209 (50.72%), Query Frame = 3
Query:   78 PIIDLSKLNG---DERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGL----EAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDV 683
            P+ID+S+L     +ER    E I  A   WGFF+++NHGIS ++L+ +++     + +  D++ K    S G         + +  L W   F   H+P++++++  D        M++FA E E +A                  K+    +   T   +++ YPPCPKP  + GL  HTD+  + +L+Q D+V GLQL+KD++W+ V
Sbjct:   43 PVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQLSWSEAF---HVPMTDISDNKDFTT-LSSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRN---TCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQ-DQVGGLQLIKDNRWIAV 243          
BLAST of CF834732 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19
Identity = 69/212 (32.55%), Postives = 105/212 (49.53%), Query Frame = 3
Query:   78 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVA----SKGLEAVQSEVND-----LDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVD 680
            P++DLS  + DE S    ++  A E WG F++VNHGI  EL+  +Q + ++ +   +    K+ VA    SK +E   +++         W    F R  P S  N    P    +YR+  +E+AV ++K++                  K+   G +   +  K++ YPPCP+PDL  G+ AHTD  GI LL   +EV GLQ+ KDD W D
Sbjct:   44 PVVDLS--DPDEESVRRAVVK-ASEEWGLFQVVNHGIPTELIRRLQDVGRKFFE--LPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGL-GGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLV-PNEVPGLQVFKDDHWFD 248          
The following BLAST results are available for this feature:
BLAST of CF834732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ACCO1_DORSP2.078e-6760.391-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_ORYSI6.683e-6659.901-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ1.945e-6559.421-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_DENCR1.763e-5856.221-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO_MUSAC7.190e-4445.451-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
SRG1_ARATH2.659e-2230.95Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FLS_SOLTU5.544e-2030.52Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_PETCR9.457e-2032.86Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
G2OX8_ARATH2.751e-1929.67Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FLS1_ARATH6.130e-1932.55Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834732 ID=CF834732; Name=CF834732; organism=Citrus sinensis; type=EST; length=683bp
GAGTTTTTTACGTGATCATAGAGTAAGAAGGGAGATTGTGGGAGTTAAGA
AACAAACAAATAACAATGGAGAATTTTCCAATTATTGACTTGTCAAAGCT
CAATGGTGATGAGAGAAGTGCTACCATGGAAATGATCAATGATGCCTGTG
AGAACTGGGGTTTCTTTGAGTTGGTGAATCATGGGATATCACATGAGCTG
CTGGACACTGTTCAGAGGTTGACAAAGGAGCATTACGGGAAGTGTATGGA
CCAAAGATTCAAGCAAATGGTGGCAAGCAAGGGCCTTGAAGCTGTTCAGT
CCGAAGTTAATGATTTGGACTGGGAAAGCACTTTCTTCTTGCGCCACCTT
CCTGTTTCAAACATGGCTGAAATCCCCGATCTTGAAGATGATTACAGGAA
GGCAATGAAGGAATTTGCCGTTGAATTGGAGAAGGTTGCTGAGCAACTTC
TGGAATTGTTGTGTGAGAATCTTGGGCTGGAGGAAGGGTATTTGAAGAAA
GTGTTTTATGGGTCCAAAGGACCAACCTTTGGCACCAAGGTCAGCAATTA
CCCTCCATGCCCAAAACCAGATCTGATCAAGGGACTTAGGGCCCATACTG
ATGCTGGTGGCATCATCTTGCTCTTTCAAGATGACGAAGTCAGTGGCCTC
CAGCTGCTCAAAGATGACCAATGGGTTGATGTT
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