CF834747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15 Identity = 52/190 (27.37%), Postives = 97/190 (51.05%), Query Frame = -2 Query: 191 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYK--DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVK-YQVCSPEALSKLL--VKHGVTQPAAE 745 K++++ DH A+AG+ +D +L R + + + Y P+PV +L L D Q TQ RP+GV L AG D++ G LY + PSGNY ++ ++ L++ ++ +D + E+ ++ AL + +T+ LTS +A V G V+ +++ + + +++ ++ PAAE Sbjct: 62 KVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSMEAAEEAPAAE 250
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.829e-14 Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAG-WDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDY-KDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 745 K+Y++ D + C + G+ DA L AR++AQ + P+ L + + KQ +TQ+ G RPFGVSFL+AG D Y L +DPSG WK LK D+ +D++ + A L++L K + +D+LE+ Sbjct: 58 KIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYA--LMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPEDEMDMKTATVEILRLLGKARELGPKEADRLEI 206
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.388e-14 Identity = 48/159 (30.19%), Postives = 84/159 (52.83%), Query Frame = -2 Query: 290 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 745 K+ K+D H+ AG+++D+ L+ A+++AQ + + Y + VE + QS+ + QFG RPFGV+ LFAG D+ G +L+ DPSG + K + LK+ Y D ++ +E +++AL +L + M+ L S +E+ + Sbjct: 66 KISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA---LQFGDDDVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVMEE-KLNSANVEVVVI 219
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.119e-14 Identity = 44/138 (31.88%), Postives = 68/138 (49.28%), Query Frame = -2 Query: 335 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTM 742 ++ I ++ G+ +DA L+ AR +A + + Y MPV+ L + + D Q YTQ +RP GV + G D YG QLY DP+G+Y G K + L++ K+D + EE VQ A+ L + Sbjct: 69 LFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVL 206
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 3.119e-14 Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = -2 Query: 269 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 745 +++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + G+ Sbjct: 66 RLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVA-KIIYIVHDEVKDKAFELELSWVGELTKGR 224
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 4.074e-14 Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = -2 Query: 269 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 745 +++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + G+ Sbjct: 66 RLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVA-KIIYIVHDEVKDKAFELELSWVGELTKGR 224
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.074e-14 Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = -2 Query: 269 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 745 +++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + +G+ Sbjct: 66 RLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVA-KIIYIVHDEVKDKAFELELSWVGELTNGR 224
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 4.074e-14 Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = -2 Query: 269 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 745 +++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + +G+ Sbjct: 66 RLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVA-KIIYIVHDEVKDKAFELELSWVGEITNGR 224
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.321e-14 Identity = 50/155 (32.26%), Postives = 83/155 (53.55%), Query Frame = -2 Query: 269 DHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYK-DDISREE-AVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 727 DHV A AG+ +DA ILIN A+V+ Q + ++P+ +E + + + KQ YTQ G RPFG+S L G+D + L+ ++PSG + +K + ++ Y+ +++S E AV+LA++ L + S EV +M +GK Sbjct: 68 DHVVMAFAGL-TDARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLEVAQSGQ------HNLEVAIMENGK 215
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.321e-14 Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 745 +++ ID HV A+AG ++DA LI AR +A+ Y Y +P+P++ L Q + +T +G +RPFG S G D+ YG QL++ +PSG+ G+ ++ L++ +++ EA++ +++ D +LEL Sbjct: 66 RVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQ-YGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREAIKEVSRIIYSVHDEVKDKDFELEL 213 The following BLAST results are available for this feature:
BLAST of CF834747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834747 ID=CF834747; Name=CF834747; organism=Citrus sinensis; type=EST; length=746bpback to top |