CF834747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.920e-12 Identity = 49/156 (31.41%), Postives = 75/156 (48.08%), Query Frame = -2 Query: 290 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGN----YGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 745 K+ K D+H+ ++AG+ DA +L N R Q + + + VE+ LCD Q TQ G RP+GV L G+DK+ G L PSGN YG + L K D + +E ++ ++ +S+++ SLT D L +A V Sbjct: 62 KIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKS-GAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIV 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12 Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = -2 Query: 335 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTM 742 ++ I ++ GI +DA L+ AR QA + + Y MPV+ L + + D Q YTQ +RP GV + G D+ G LY DP+G++ G K + L++ K++ + +E VQ A+ L + Sbjct: 69 LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVL 206
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1_CAEEL (Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.504e-12 Identity = 33/90 (36.67%), Postives = 56/90 (62.22%), Query Frame = -2 Query: 476 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPS 745 K+Y+ID H ++AG++SD IL + + + + Y++ +P+++L +S+ Q TQ+ G RPFGV L AG+DK+ G + +DPS Sbjct: 62 KVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKD-GAHIIQTDPS 150
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12 Identity = 56/188 (29.79%), Postives = 90/188 (47.87%), Query Frame = -2 Query: 194 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQ--DYKDDISREEAVQLALKVLSKTMD-STSLTSDKLELAEVFLMPSGK-VKYQVCSPEALSKLLVKHGVTQPAA 745 K+ +IDDH+ A+AG+ DA +L N + +A + P+PV +L+ + + Q TQ G RP+GV FL G+D++ G L PSG + ++ +++ D D SREE + AL+ L T+ LT + + ++ + GK KY + + L K G PAA Sbjct: 62 KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDES-GPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVI-----GKDEKYTLYDQNDTKEWLDKLGDKGPAA 243
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11 Identity = 43/178 (24.16%), Postives = 83/178 (46.63%), Query Frame = -2 Query: 218 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLS-KTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVK 742 +YK+ D++ C GI+ D+ + A + + + + +P L + + D Q TQ RP GV+ + G D G QL+ DP+G + G+K + L++ +K + +S++E +Q++L V++ T+ S K E+ + K+ + + E + L K Sbjct: 68 LYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDIDSQLTK 245
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = -2 Query: 455 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 745 K +K+D+HV A++G+++D L R + Y Y + P+ L + Q + QF G RPFGV L AG+D+ G +LY + PSG+ +K Sbjct: 63 KAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQ-GPRLYQTVPSGDVFDFK 158 The following BLAST results are available for this feature:
BLAST of CF834747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834747 ID=CF834747; Name=CF834747; organism=Citrus sinensis; type=EST; length=746bpback to top |