CF834748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP56_MACFA (Nucleolar protein 56 OS=Macaca fascicularis GN=NOP56 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 509 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP56_HUMAN (Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 509 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP56_BOVIN (Nucleolar protein 56 OS=Bos taurus GN=NOP56 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 509 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_PICST (Nucleolar protein 58 OS=Pichia stipitis GN=NOP58 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS--TRGDPSGTAGRSFREEIHKKI 497 ++ SRM IAPNL+A+VG V A+L+ AG L++LAK PA +Q+LGA+K T + G L + + + R+LAAK+ +A R DS D SG G R ++ ++ Sbjct: 275 YLSSRMKAIAPNLTALVGELVGARLIAHAGSLTSLAKAPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQASGKNKGKIARVLAAKAAVALRYDSLAEERDDSGDFGLEVRAKVESRL 398
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_DEBHA (Nucleolar protein 58 OS=Debaryomyces hansenii GN=NOP58 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTR--GDPSGTAGRSFREEIHKKI 497 ++ SRM IAPNL+A+VG V A+L+ +G L++LAK PA +Q+LGA+K T + G L + + + R+LAAK+ +A R DS D SG G S R ++ ++ Sbjct: 275 YLSSRMKAIAPNLTALVGELVGARLIAHSGSLTSLAKAPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQASGKNKGKIARVLAAKAAVALRYDSLAEDRDDSGDFGLSVRTKVESRL 398
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_PICGU (Nucleolar protein 58 OS=Pichia guilliermondii GN=NOP58 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVD--STRGDPSGTAGRSFREEIHKKI 497 ++ +RM IAPNL+A+VG + A+L+ AG L++L+K PA +Q+LGA+K T + G L + + + R+LAAK+ +A R D S D SG G S R ++ ++ Sbjct: 275 YLSARMKAIAPNLTALVGELIGARLIAHAGSLTSLSKAPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQATGKNKGKIARVLAAKAAVALRYDSLSEERDDSGDFGFSVRAKVESRL 398
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP5B_ARATH (Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12 Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 497 +++SRM+ IAPNL+A+VG V A+L+ G L L+K P VQ+LGA+K T + + G + + P + + R LAAK+ LA RVD+ T G R ++ ++ Sbjct: 273 YLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARL 394
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP5A_ARATH (Probable nucleolar protein 5-1 OS=Arabidopsis thaliana GN=NOP5-1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 497 +++SRM+ IAPNL+A+VG V A+L+ G L LAK P VQ+LGA+K T + + G + + P + + R LAAKS LA R D+ T G R ++ ++ Sbjct: 272 YLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARL 393
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_USTMA (Nucleolar protein 58 OS=Ustilago maydis GN=NOP58 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 42/128 (32.81%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS-----TRGDPSG-TAGRSFREEIHKKI 497 ++++RM+ IAPNL+A+VG V A+L+ AG L LAK PA VQ+LGA+K T + G + + + P L+ + R++A K+ L+ R+D+ T+ D T G R ++ ++ Sbjct: 285 YLQNRMAAIAPNLTALVGDLVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHSSLVGQAPQKLKGKMARMVATKAALSIRLDALADADTKSDEGAPTVGIEARAKLESRL 412
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_CRYNE (Nucleolar protein 58 OS=Cryptococcus neoformans GN=NOP58 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12 Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 434 ++ +RM IAPNL+A+VG V A+L+ AG L LAK PA VQ+LGA+K T + G + + P L+ + R++A K+ L+ RVD+ Sbjct: 285 YLRNRMQAIAPNLTALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAPQKLKGKMARMVATKAALSIRVDA 385 The following BLAST results are available for this feature:
BLAST of CF834748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834748 ID=CF834748; Name=CF834748; organism=Citrus sinensis; type=EST; length=721bpback to top |