CF834750

Overview
NameCF834750
Unique NameCF834750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLL---QGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG + C  V  R  NF G G  DP++D  +   + A+    P +  T +E+D GS   FD S+   +   R +  SD  L  +  T +++++LL   + SL  F  EF KS+ KM   +VKTGS+GEIR+ C+ +N
Sbjct:  200 IGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQ---CPQNGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSLR-FGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN 331          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = -1
Query:  281 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 676
            G + C  +  RLYNF+  G  DP LD  Y + L+ ++C    + + L++ D  +   FD  YY  L + +GL  SD  L ++   S TL LV++   G    FF  FAK++ +M      TG +GEIR  C  VN
Sbjct:  195 GKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLR-KQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQ-GKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVN 327          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 52/135 (38.52%), Postives = 69/135 (51.11%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSF--TLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IGV+ CT+   RLYN  G    D  L+  Y   L++    T  DN  +  +D  S   FD +Y+ LLL  +GL  SD  L T +   T +LVK   +     FF +FAKS+  MG  +  TG  GEIRK C  +N
Sbjct:  214 IGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNN-ISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDE-RLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSE--GEIRKRCAFVN 679
            IG + C ++ SRLYN+      DP++D++YA  L+ R+CR  ++    +++DP +   FD  YY  L K  G+  +D  L  +  T  LVK   + S + F  +FA S+ K+    V TG +  GEIRK C+  N
Sbjct:  215 IGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQ-RRCRWASET---VDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSN 345          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            +G +HC  V  R++ F G+   DP L+  YA  L+ + C    D    + MDP + KTFD +Y+  L + +GLF SD  L T+  +   V      S   F   F  ++ K+GR  VK  S G IR+ C   N
Sbjct:  199 LGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQ-KACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTA-FNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALD----SEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            +G +HC+ V  RLYN+   G   P ++    SE A     R  +   D    L  D GS  +F  S+Y+ +L  + +   D  L  N  T  + K+  +G  E+F   FA S+ KMG   V T +EGEIRK C  +N
Sbjct:  200 MGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEG-FEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = -1
Query:  293 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRC 676
            G + C + S RL+NF+  G+ DP L++ Y A L+ + C       T+  +DP +  TFD +Y++ L   RGL  SD  L  T+ + T+++V      +   FF  F +S+  MG     TGS GEIR  C
Sbjct:  196 GRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQ-QICPQGGSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNN-FSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNC 323          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13
Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG++HC S + RLY      +QDP ++  +A +LK R C T N + T +  D  S   FD  YY  L+ R+GLF SD  L  +  T  +V+       + FF  F  ++ KMG+  V TG++GEIR  C+  N
Sbjct:  215 IGIAHCPSFTDRLYP-----NQDPTMNQFFANSLK-RTCPTANSSNTQVN-DIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQ-QLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13
Identity = 47/134 (35.07%), Postives = 68/134 (50.75%), Query Frame = -1
Query:  281 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN--SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 676
            G   C + ++RL+NF G G+ DP L+S   ++L+ + C     NT +  +D  +   FD +Y+  L    GL  SD  L +N  S T+ +V          FF  F +S+ KMG     TGS GEIR+ C  VN
Sbjct:  203 GRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQ-QLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTL-FFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVN 334          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = -1
Query:  269 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN*LSL 676
            G + C  +  RLYNF+  G  DP L++ Y   L+ ++C    + + L++ D  +   FD  YY  L +++GL  SD  L ++   + T+ LV+    G+ + FF  F +++ +MG     TG++GEIR  C  VN  SL
Sbjct:  201 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLR-QQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGT-QKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSL 337          
The following BLAST results are available for this feature:
BLAST of CF834750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PER69_ARATH4.506e-1436.03Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER37_ARATH4.506e-1435.56Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER9_ARATH7.686e-1438.52Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER7_ARATH7.686e-1435.56Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER35_ARATH7.686e-1434.59Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER26_ARATH7.686e-1434.31Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER15_IPOBA7.686e-1435.38Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER12_ARATH1.004e-1337.59Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER54_ARATH1.311e-1335.07Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER1B_ARMRU1.311e-1333.09Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834750 ID=CF834750; Name=CF834750; organism=Citrus sinensis; type=EST; length=679bp
TTTTTTTTTTTTTTGTCTCAATTTCAATTGCTTTTATTACAAGACCCCTA
ATCTTCTTGAAAAAGTAAAAGAGATACGGTGGGGCTCCATTATTCGAACA
GTATGCAAAGAAGCCCAAATCTCGCCGTTCGGCTAGGAGATCATTGACCT
TCTCACAGTAAAAGCAAAACTTGGTCATTCATTTTTGTTCGTCGGCCCAA
ATAAGAAAATAAAATCAAGGAGAAAAAGAAAATGGAATGAAAAAGTAGAA
AAAAGACCGAAATGCCTCCAAGCTTAGCTAATTGACAAAAGCGCAACGCT
TCCTGATCTCACCTTCTGATCCAGTCTTAACCTTATTCCTTCCCATTTTC
TCCACAGACTTGGCAAATTCAGCAAAGAAATTTTCCAATGATCCCTGAAG
AAGTTGCTTAACCAAAGACAAAGTGAAAGAGTTTGTAGTCAAAGAAGCAT
CAGATACAAAGAGACCCCTTCTCTTAAGCAAAAGATTGTAGTAGCTAAGA
TCAAATGTCTTGCGGCTACCAGGGTCCATTTCAAGTAATGTAGTGTTATC
ATTTGGAGTTCTGCACTTTCTTGCCTTGAGATTTGCTGCATATTCACTGT
CAAGAGCAGGGTCTTGGTCACCCACTCCTGTGAAATTGTACAGCCGGCTT
GAAACTGAAGTGCAGTGGGAGACCCCGAT
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