CF834750

Overview
NameCF834750
Unique NameCF834750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12
Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = -1
Query:  287 IGVSHCTSVSSRLYNFTGVGDQDP--ALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAF 679
            IG + C  +  RL+NF G G  DP  A  S   + LK       + ++ L  +D  S   FD +YY  L+   GL  SD +L T+    +LVK   +     F  +FA S+ KMG   V TGS+G IR +C F
Sbjct:  217 IGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPY-LFSRDFAVSMVKMGNIGVMTGSDGVIRGKCGF 348          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12
Identity = 45/133 (33.83%), Postives = 65/133 (48.87%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            +G +HC  V +R+YNF      DP L+  YA  L+   C    D    + MDP + + FD  Y+  L + +GLF SD  L T+  +   V    + S+  F   F  ++ K+GR  VKT   G IR+ C   N
Sbjct:  199 LGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQL-ACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWAKNSVA-FNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN 329          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12
Identity = 47/134 (35.07%), Postives = 68/134 (50.75%), Query Frame = -1
Query:  281 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 676
            G + C   ++RL+NF+G G+ DP L+S   + L+ + C      +T+  +D  +   FD +Y+  L    GL  SD  L  TT S T+++V          FF  FA+S+  MG     TGS GEIR  C  VN
Sbjct:  202 GRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQ-QLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTL-FFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG   C S+  RLYN +G G  DPAL+  Y   L  + C    D     ++D  + + FD  Y+  L+  RG   SD +L TN  T   VK   +   + FF  FA+ + K+G   +++G  GEIR  C  VN
Sbjct:  192 IGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLD-KLCPLGGDENVTGDLD-ATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQ-DEFFRAFAEGMVKLG--DLQSGRPGEIRFNCRVVN 319          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12
Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQL---LQGSLE-NFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG + C     RLYNFT  G+ DP +   +   LK   C    D +  + +D GS   FD S++  L     +  SD  L +++ T ++VK+    L+G L   F  EF K++ KM    VKT  +GE+RK C+ VN
Sbjct:  193 IGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKT-LCPPNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWSDAETNAVVKKYASRLRGLLGFRFDYEFGKAMIKMSSIDVKTDVDGEVRKVCSKVN 328          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = -1
Query:  269 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN*LSL 676
            G + C  +  RLYNF+  G  DP L++ Y   L+   C    + + L++ D  +   FD  YY  L +++GL  SD  L ++   + T+ LV+     S + FF  F +++++MG     TG++G+IR  C  VN  SL
Sbjct:  203 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGL-CPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFAN-STQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSL 339          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = -1
Query:  281 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLE-MDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQ--LLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 676
            GV+HC +   R          +PA+D ++A  L+  KC   N + TL + +D  +   FD  YY  L+ R+GLF SD  L  +  T  +  +  L QG+   FF +FA+S+ KM    + TG++GEIR  CA  N
Sbjct:   27 GVAHCPAFEDRSSRVR----HNPAIDGKFATALR-NKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGA---FFEQFARSMTKMSNMDILTGTKGEIRNNCAVPN 153          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11
Identity = 42/134 (31.34%), Postives = 67/134 (50.00%), Query Frame = -1
Query:  281 GVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 676
            G + C +   RL+NF G G+ D  +D+ +   L+    +  N+  T   +D  +   FD  Y+  L   +GL  +D  L  T+ S T+++V +   GS   FF +F  S+ K+G     TG+ G+IR  C  VN
Sbjct:  192 GRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNR-YAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11
Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG S C     RLY      +    +D+ +A+  K R+C T   +  L  +D  +  +FD +YY  L++++GL V+D  L  +  +   +      +   F A+FA ++ KMG  +  TGS GEIRK C+FVN
Sbjct:  196 IGQSQCFLFRDRLY------ENSSDIDAGFASTRK-RRCPTVGGDGNLAALDLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11
Identity = 51/139 (36.69%), Postives = 69/139 (49.64%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFT---GVGDQDPALDSEYAANLKARKCRTPNDNTTLLE--MDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAE-FAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            +G S C S   R++N +        D  L   YA  L+A  C +    TT +   MDPG+    D +YY LL +  GLF SD  L  N    +LV      S E  + E FA ++ KMGR +V+TG+ GE+R  C  VN
Sbjct:  204 VGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRAL-CPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSF--ASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          
The following BLAST results are available for this feature:
BLAST of CF834750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PER10_ARATH1.450e-1236.09Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER73_ARATH3.229e-1233.83Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER53_ARATH3.229e-1235.07Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER17_ARATH4.217e-1235.34Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER25_ARATH5.508e-1235.04Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER1A_ARMRU5.508e-1232.37Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER2_HORVU9.395e-1235.56Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PERX_TOBAC1.227e-1131.34Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER5_ARATH2.093e-1133.08Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER1_MAIZE3.570e-1136.69Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834750 ID=CF834750; Name=CF834750; organism=Citrus sinensis; type=EST; length=679bp
TTTTTTTTTTTTTTGTCTCAATTTCAATTGCTTTTATTACAAGACCCCTA
ATCTTCTTGAAAAAGTAAAAGAGATACGGTGGGGCTCCATTATTCGAACA
GTATGCAAAGAAGCCCAAATCTCGCCGTTCGGCTAGGAGATCATTGACCT
TCTCACAGTAAAAGCAAAACTTGGTCATTCATTTTTGTTCGTCGGCCCAA
ATAAGAAAATAAAATCAAGGAGAAAAAGAAAATGGAATGAAAAAGTAGAA
AAAAGACCGAAATGCCTCCAAGCTTAGCTAATTGACAAAAGCGCAACGCT
TCCTGATCTCACCTTCTGATCCAGTCTTAACCTTATTCCTTCCCATTTTC
TCCACAGACTTGGCAAATTCAGCAAAGAAATTTTCCAATGATCCCTGAAG
AAGTTGCTTAACCAAAGACAAAGTGAAAGAGTTTGTAGTCAAAGAAGCAT
CAGATACAAAGAGACCCCTTCTCTTAAGCAAAAGATTGTAGTAGCTAAGA
TCAAATGTCTTGCGGCTACCAGGGTCCATTTCAAGTAATGTAGTGTTATC
ATTTGGAGTTCTGCACTTTCTTGCCTTGAGATTTGCTGCATATTCACTGT
CAAGAGCAGGGTCTTGGTCACCCACTCCTGTGAAATTGTACAGCCGGCTT
GAAACTGAAGTGCAGTGGGAGACCCCGAT
back to top