CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = -3 
Query:  296 MYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 601
            M+QS    L +LP  T VYCGHEYT  N  FALT++P+N               A   T+PS+I  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  156 MFQS-LQKLVALPGDTAVYCGHEYTESNARFALTIDPANSALKERAAEIARLRAADRMTLPSSIALEMATNPFLRWHDAGIRSRLGLQDAPDEAVFAEIRKRKD 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XYLFA (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa GN=gloB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.787e-11
Identity = 37/102 (36.27%), Postives = 52/102 (50.98%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 577
            L +LP  T+V CGHEYT+ N  FAL V+P+N               A LPT+P ++E EL TNPF+R   P +      +      D +E    +R  K+N+
Sbjct:  151 LAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLANLPTLPISLESELNTNPFLRTAAPTIHAATATHLQRTPIDEVEVFATLRHWKNNF 252
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SYNP2 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = -3 
Query:  296 LPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKD 568
            LP  T ++C HEYT+KN+ F+LTV+P N                  PTIP+ +  E +TNPF+R    +LQ  +   DP+    ++R ++D
Sbjct:  167 LPDNTNIWCAHEYTLKNIKFSLTVDPENEALQRRFQQVQTQRQRQKPTIPTVLALEKQTNPFLRCSDRQLQANLKTTDPLRVFTKLRGKRD 257
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS4 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 40/108 (37.04%), Postives = 53/108 (49.07%), Query Frame = -3 
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND--PIEALREIRKRKDNW 607
            E M+QS    L +LP  T +  GHEY   N  FA T+EP +                G PT+PS + +E+ TNPF+R     L+  VG  D    E   EIR+RKD +
Sbjct:  149 EAMWQS-LRKLSALPPETMICSGHEYAASNARFAATLEPDSPMLIFRVGSIAAARKEGRPTVPSHLSDEIATNPFLRAGEASLKAAVGMVDAEDAEVFAEIRRRKDKF 255
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS1 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 40/108 (37.04%), Postives = 53/108 (49.07%), Query Frame = -3 
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND--PIEALREIRKRKDNW 607
            E M+QS    L +LP  T +  GHEY   N  FA T+EP +                G PT+PS + +E+ TNPF+R     L+  VG  D    E   EIR+RKD +
Sbjct:  149 EAMWQS-LRKLSALPPETMICSGHEYAASNARFAATLEPDSPMLIFRVGSIAAARKEGRPTVPSHLSDEIATNPFLRAGEASLKAAVGMVDAEDAEVFAEIRRRKDKF 255
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPB (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisB18) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = -3 
Query:  296 LPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKD 568
            LP   ++YCGHEYT  N+ FALTVEP+N               AGLPTIP+ + +E   N F+R D P +   V       +E   E+R+RK+
Sbjct:  161 LPDDMRLYCGHEYTAANVKFALTVEPNNPALQARAAEVAHLRTAGLPTIPTLLGDEKRANVFLRADEPTVAAGVRLKGAGAVEVFTELRERKN 253
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOP5 (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisA53) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 37/93 (39.78%), Postives = 48/93 (51.61%), Query Frame = -3 
Query:  296 LPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKD 568
            LP   ++YCGHEYT  N+ FAL VEP N               AG PTIP+ + EE   N F+R D P +   V     DP+    E+R+RK+
Sbjct:  161 LPDDMRLYCGHEYTAANVKFALGVEPDNPALQARAAQVTALRAAGQPTIPTLLGEEKAANVFLRADEPSVAASVRLKGADPVAVFTELRERKN 253
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSU (Hydroxyacylglutathione hydrolase OS=Brucella suis GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  160 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 255
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSI (Hydroxyacylglutathione hydrolase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  163 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUO2 (Hydroxyacylglutathione hydrolase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gloB PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  160 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 255
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_OCHA42.899e-1143.27Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_XYLFA3.787e-1136.27Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_SYNP24.945e-1135.16Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_RHOS44.945e-1137.04Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_RHOS14.945e-1137.04Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_RHOPB4.945e-1139.78Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_RHOP54.945e-1139.78Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_BRUSU6.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUSI6.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUO26.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella ovis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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