CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_VIBCH (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae GN=gloB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.266e-23
Identity = 70/190 (36.84%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN----DPIEALREIRKRKDNW 584
            P I V G   + +   TH VE+GD+  +      + L  P HT G I Y   GK      +F GD LF AGCG+ FEG+ EQM+ SL   L SLP+ TQVY  HEYT  N+ FAL VE  N                  PT+P+T+  E   NPF+R   P +   V       DP+     +R+ K+ +
Sbjct:   71 PEIHVVGPAQEPIPTLTHPVEDGDQIELFDE-RFMVLGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRVFEGTMEQMFSSLNKLL-SLPEETQVYSAHEYTAANVAFALAVEPENEQLHIYRDEVSRLRAQNQPTLPTTLGREKWVNPFLRTQEPSVIRSVASQVSTLDPLTIFTALREWKNEF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_VIBC3 (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.266e-23
Identity = 70/190 (36.84%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN----DPIEALREIRKRKDNW 584
            P I V G   + +   TH VE+GD+  +      + L  P HT G I Y   GK      +F GD LF AGCG+ FEG+ EQM+ SL   L SLP+ TQVY  HEYT  N+ FAL VE  N                  PT+P+T+  E   NPF+R   P +   V       DP+     +R+ K+ +
Sbjct:   71 PEIHVVGPAQEPIPTLTHPVEDGDQIELFDE-RFMVLGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRVFEGTMEQMFSSLNKLL-SLPEETQVYSAHEYTAANVAFALAVEPENEQLHIYRDEVSRLRAQNQPTLPTTLGREKWVNPFLRTQEPSVIRSVASQVSTLDPLTIFTALREWKNEF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ROSDO (Hydroxyacylglutathione hydrolase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.266e-23
Identity = 65/169 (38.46%), Postives = 88/169 (52.07%), Query Frame = 3
Query:   81 QVENGDKFSIGAH-VNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKD 578
            ++ +G+ F    H V+V+ +    HT G I+YY    +    AVFT D+L   GCG+ FEG+A+QM+ SL   L +LP  TQVY GHEYT  N  FALT++  N                  PT+PST+  E  TNPF+R   P ++  +        E   EIR RKD
Sbjct:   92 ELRDGESFDFAGHKVDVMDVSG--HTVGHIAYYCADAK----AVFTADSLMALGCGRLFEGTADQMWDSLS-KLAALPSETQVYSGHEYTAANARFALTIDPHNPDLISRSEGITAARAAAKPTVPSTLATEAATNPFLRAADPAIRAHLNMQHASDSEVFAEIRARKD 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: PNKD_BOVIN (Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.265e-23
Identity = 65/166 (39.16%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   36 KVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG 530
            +VYG P D++   TH + + D  S+G  + + +L TP HT+G + Y + G+  E P+ +F+GD LF++GCG+ FEG+AE M  SL   LG L   T ++ GHEY  +NL FA  VE  N+                  T PST+ EE   NPF+R     LQE +G
Sbjct:  192 RVYGSPQDSIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQGHLVYLLDGEPYEGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLG-LGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERSYNPFLRTHCLVLQEALG 355          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA7 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain PA7) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.570e-23
Identity = 65/163 (39.88%), Postives = 88/163 (53.99%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRV 500
            +KE+  G +V G   + +      +E+G++  +   V  +  H P HT G I+YY      + P +F GDTLF AGCG+ FEG+  QM++SL   L +LP  T+VYC HEYT+ NL FAL VE  N                   T+PS I  EL TNPF+RV
Sbjct:   68 LKEL-SGARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HAAQTPLLFCGDTLFAAGCGRLFEGTPAQMHRSL-ARLAALPANTRVYCTHEYTLSNLRFALAVEPENQALRERFEEATRLRERDRITLPSEISLELSTNPFLRV 224          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_BARQU (Hydroxyacylglutathione hydrolase OS=Bartonella quintana GN=gloB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.570e-23
Identity = 65/160 (40.62%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  111 GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPI--EALREIRKRKDNW 584
            G H  +L+L TP HT G +SYY      ++  +F+GDTLF  GCG+ FEG+  QM  S    L  LP  T +YCGHEYT  N LFALT+++ N                   T+P T+ +E  TNPF+R D   L++ +        E   EIRKRKDN+
Sbjct:  100 GTHT-LLALSTPGHTLGSLSYYFP----QENLLFSGDTLFSLGCGRLFEGTPAQMLNSF-KKLRQLPDETLLYCGHEYTKTNALFALTLDSHNQKLHQRVEDVFLLRAKNAMTLPVTLGQEKATNPFLRWDDRTLRKNLAMEKETDEEVFAEIRKRKDNF 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSYIN (Hydroxyacylglutathione hydrolase OS=Psychromonas ingrahamii (strain 37) GN=gloB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.275e-23
Identity = 62/156 (39.74%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  135 LHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD----LPELQELVG--FNDPIEALREIRKRKDNW 584
            +  P HT   +++Y       D  +F GDTLF  GCG+ FEGS EQM++++   L  LP+ T+VYC HEYT  NL+FA  +E  N                G PTIPSTI  E E NPF+R      + +LQ  +G   NDP+     +R+ KDN+
Sbjct:  108 MEVPGHTLDHVAFY------NDELLFCGDTLFSGGCGRVFEGSFEQMFKAVS-RLALLPENTKVYCAHEYTQNNLIFAHQIEPKNKALLNYIQQVSKKRQQGQPTIPSTIGLEKEINPFLRCQQQTVINKLQSHLGKELNDPLSCFSALRQYKDNF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: PNKD_MOUSE (Probable hydrolase PNKD OS=Mus musculus GN=Pnkd PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 3
Query:   36 KVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN---------DPIEALREIRKRKD 578
            +VYG P D +   TH + + D  S+G  + + +L TP HT+G + Y + G+  + P+ +F+GD LF++GCG+ FEG+AE M  SL   L  L   T ++ GHEY  +NL FA  VE  N+                  T PST+ EE   NPF+R    ELQE +G              + L E+R+ KD
Sbjct:  192 RVYGSPQDGIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVL-DLGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPGPGPTSDDGCSRAQLLEELRRLKD 380          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: PNKD_HUMAN (Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 3
Query:   36 KVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN---------DPIEALREIRKRKD 578
            +VYG P D +   TH + + D  S+G  + + +L TP HT+G + Y + G+  + P+ +F+GD LF++GCG+ FEG+AE M  SL   LG L   T ++ GHEY  +NL FA  VE  N+                  T PST+ EE   NPF+R     LQE +G              + L E+R+ KD
Sbjct:  192 RVYGSPQDGIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLG-LGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALGPGPGPTGDDDYSRAQLLEELRRLKD 380          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSEE4 (Hydroxyacylglutathione hydrolase OS=Pseudomonas entomophila (strain L48) GN=gloB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 66/188 (35.11%), Postives = 97/188 (51.60%), Query Frame = 3
Query:   30 GIKVYGGPLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 590
            G +V+G   + +      +E+G +  + G   +VL++  P HT G I+YY    +   P +F+GDTLF AGCG+ FEG+ EQM+ SL   L +LP+ TQVYC HEYT+ NL FA  VE  +                   ++PSTI  E +TNPF+R                 A   ++++ D W+G
Sbjct:   73 GAQVFGPANERIPARDIALEDGAQVHVLGLAFDVLAM--PGHTLGHIAYYTA--QSPTPLLFSGDTLFAAGCGRLFEGTPEQMHHSL-QRLAALPEQTQVYCAHEYTLSNLRFARAVEPHSEPVQQRFEAVTQLRADNRISLPSTIGIERQTNPFLRT----------------AEISVKQKADEWKG 239          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_VIBCH3.266e-2336.84Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]
GLO2_VIBC33.266e-2336.84Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]
GLO2_ROSDO3.266e-2338.46Hydroxyacylglutathione hydrolase OS=Roseobacter de... [more]
PNKD_BOVIN4.265e-2339.16Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2... [more]
GLO2_PSEA75.570e-2339.88Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_BARQU5.570e-2340.63Hydroxyacylglutathione hydrolase OS=Bartonella qui... [more]
GLO2_PSYIN7.275e-2339.74Hydroxyacylglutathione hydrolase OS=Psychromonas i... [more]
PNKD_MOUSE1.241e-2236.13Probable hydrolase PNKD OS=Mus musculus GN=Pnkd PE... [more]
PNKD_HUMAN1.241e-2236.13Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE... [more]
GLO2_PSEE41.241e-2235.11Hydroxyacylglutathione hydrolase OS=Pseudomonas en... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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