CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROMM (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9313) GN=gloB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 71/180 (39.44%), Postives = 95/180 (52.78%), Query Frame = 3
Query:   57 DNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYV-TGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            D +   T  V + DK S+  + V VL++    HT+  I+YY+ T KE  EDPAVF GDTLF AGCG+ FEG+AE M+++L   L  LP  T+VYC HEYT  NL +A  +   +V               G  ++PS+I EE  TN F+R                + L E+R  KD WR
Sbjct:   95 DRIPFQTISVRDRDKVSLLNSSVEVLAVAG--HTRAHIAYYLPTNKEDLEDPAVFCGDTLFGAGCGRLFEGTAEDMFKAL-QRLSCLPAKTRVYCAHEYTEANLRWASALHPEDVAISERLADVSSRRQRGALSLPSSISEEQRTNLFVRA------------QSSKELAELRHHKDQWR 259          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROMT (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain NATL2A) GN=gloB PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 3
Query:   75 THQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            T  V++ D F++  A + V+ +H   HT   I++Y++ +  +   +F GDTLF  GCG+  EGS  QM++SL   L SLP+ T++Y  HEYT  NL +AL++E GN+               G+ ++PST+ EE +TN F+              + +E    +RK KD W+
Sbjct:   94 TFSVDDNDIFNLMDAEIKVIEVHG--HTDNHIAFYISKQNAKCNILFPGDTLFGGGCGRLLEGSPVQMFESL-YKLNSLPENTEIYPAHEYTESNLKWALSLEPGNISIIERLKLIQKKLQKGMSSLPSTLSEERKTNLFL------------IAENVEKFTMLRKHKDRWK 250          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROM1 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain NATL1A) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 3
Query:   75 THQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            T  V++ D F++  A + V+ +H   HT   I++Y++ +  +   +F GDTLF  GCG+  EGS  QM++SL   L SLP+ T++Y  HEYT  NL +AL++E GN+               G+ ++PST+ EE +TN F+              + +E    +RK KD W+
Sbjct:   94 TFSVDDNDIFNLMDAEIKVIEVHG--HTDNHIAFYISKQNAKCNILFPGDTLFGGGCGRLLEGSPVQMFESL-YKLNSLPENTEIYPAHEYTESNLKWALSLEPGNISIIERLKLIQKKLQKGMSSLPSTLSEERKTNLFL------------IAENVEKFTMLRKHKDRWK 250          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PHOLL (Hydroxyacylglutathione hydrolase OS=Photorhabdus luminescens subsp. laumondii GN=gloB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 67/190 (35.26%), Postives = 98/190 (51.58%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF---NDPIEAL-REIRKRKDNW 584
            P + VYG      KG T  V  GD  + G H +   +  P HT G I++Y      + P +F GDTLF  GCG+ FEG+AEQMY S+   +  LP  T + C HEYT+ N+ FA  V   N                  PTIP+T++ E + N F++ D  +LQ  +G    + P+ A+  ++R++KD +
Sbjct:   70 PELLVYGPAETQSKGATIIVCGGDSINFG-HFSFQIIDVPGHTLGHIAFY------QAPYLFCGDTLFSGGCGRLFEGTAEQMYTSI-GKIAELPDDTLICCAHEYTISNMKFAHAV-LPNQTISEYQQKVIRMRENNQPTIPTTLQTEKKINIFLKCDDIDLQRNIGITPNSQPLSAVFHQLRRQKDQF 250          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PELUB (Hydroxyacylglutathione hydrolase OS=Pelagibacter ubique GN=gloB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 3
Query:  138 HTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMR 497
            H P HT G I +Y   +E    +VFTGDTLF  GCGK FEG+  QMY SL + + +LP+ T++YCGHEYT +N  F +  +  N                 LPTIPSTI+EELE N F+R
Sbjct:  108 HIPGHTLGHICFYFYNEE----SVFTGDTLFSLGCGKIFEGTYSQMYNSL-MKIKALPEKTKIYCGHEYTKQNSKFCIAHDQDNENLKVKIKLIDEKLEKNLPTIPSTIKEELECNIFLR 222          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SHEPC (Hydroxyacylglutathione hydrolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 3
Query:  108 IGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELV--GFNDP 542
            + A + VL++  P HT G I+Y++      + A+F GDTLF AGCG+ FEG+AEQM  SL + L  LP  T+V+C HEYT+ NL FALTVE  N+                  TIPS+I  E   NPF+RV    + + +   F+DP
Sbjct:  109 LNAQIQVLNV--PGHTAGHIAYFI------EDALFCGDTLFSAGCGRLFEGTAEQMLSSLTL-LAKLPANTRVFCAHEYTLSNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPSSIALERAINPFLRVGEQSIIDSIKQHFDDP 246          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPG (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain GB-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 590
            + + G +V G   + + G    ++ GDK  + G    VL++  P HT G I+++  G     P +F+GDTLF AGCG+ FEG+ EQM  +L   L +LP+ T+VYC HEYT+ NL FA  VE  N                   ++PSTI  E  TNPF+R                E L  ++++ D W+G
Sbjct:   69 KQLSGARVCGPANERIPGRDLALDEGDKVDVLGVTFQVLAV--PGHTLGHIAFFSDGPP--TPVLFSGDTLFAAGCGRMFEGTPEQMQPAL-ARLAALPEQTEVYCAHEYTLSNLRFAKAVEPTNTHVQQRFEDVTRLRAENRISLPSTIGLERLTNPFLRTS--------------ETL--VKQKADEWKG 239          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROM3 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9303) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 70/180 (38.89%), Postives = 96/180 (53.33%), Query Frame = 3
Query:   57 DNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYV-TGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            D +   T  V + DK S+  + V VL++    HT+  I+YY+ T KE  EDPAVF GDTLF AGCG+ FEG+AE M+++L   L  LP  T+VYC HEYT  NL +A  +   ++               G  ++PS+I EE  TN F+R                + L E+R+ KD WR
Sbjct:   95 DRIPFQTISVRDRDKISLLNSSVEVLAVAG--HTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRLFEGTAEDMFKAL-QRLCCLPAKTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRGALSLPSSISEEQRTNLFVRA------------QNSKELAELRQHKDQWR 259          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_AGRT5 (Hydroxyacylglutathione hydrolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gloB PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 71/185 (38.38%), Postives = 93/185 (50.27%), Query Frame = 3
Query:   48 GPLDN---VKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEA--LREIRKRKDNW 584
            GP D    + G      +GD+F   G  V V++  TP HT G I YY+     +D  +F  DTLF  GCG+ FE  A  M+ S    L +LP  T+VY GHEYT+ N  FALTV+  N                   TIP+TI  E +TNP+MRV    ++  +G     +A    EIR RKDN+
Sbjct:   79 GPYDEAIAIPGLDRSQADGDEFEFAGRRVQVIA--TPGHTAGHICYYLP----DDGLLFAADTLFAMGCGRLFERPAADMWHSF-QKLMALPDDTRVYFGHEYTLSNARFALTVDPDNAVLRERAARVETARQANEFTIPTTIGLEKQTNPYMRVADAGIRRHLGLEGAADADVFAEIRTRKDNF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_YERPP (Hydroxyacylglutathione hydrolase OS=Yersinia pestis (strain Pestoides F) GN=gloB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.764e-22
Identity = 67/195 (34.36%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEAL----REIRKRKDNW 584
            ++   P I VYG      KG T  V +GD  +I    N   +  P HT G I+YY        P +F GDTLF AGCG+  EG+ EQMY S+   L  LP  T + C HEYT+ NL FA  +   +                 LP++P  ++ E + N F+R +  +LQ  +    P ++L     E+R RKD++
Sbjct:   65 LRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQ-NYTIIAVPGHTLGHIAYY------SSPYLFCGDTLFSAGCGRLLEGTPEQMYASI-QRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFERKINVFLRCNDIDLQRKIETTSPPDSLVSVFCELRSRKDSF 251          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_PROMM1.241e-2239.44Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_PROMT1.621e-2234.30Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_PROM11.621e-2234.30Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_PHOLL1.621e-2235.26Hydroxyacylglutathione hydrolase OS=Photorhabdus l... [more]
GLO2_PELUB1.621e-2246.67Hydroxyacylglutathione hydrolase OS=Pelagibacter u... [more]
GLO2_SHEPC2.117e-2242.18Hydroxyacylglutathione hydrolase OS=Shewanella put... [more]
GLO2_PSEPG2.117e-2234.90Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_PROM32.117e-2238.89Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_AGRT52.117e-2238.38Hydroxyacylglutathione hydrolase OS=Agrobacterium ... [more]
GLO2_YERPP2.764e-2234.36Hydroxyacylglutathione hydrolase OS=Yersinia pesti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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