CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNP6 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gloB PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.335e-29
Identity = 75/178 (42.13%), Postives = 94/178 (52.81%), Query Frame = 3
Query:   57 DNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDP--AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            D + G T  +E GD+  I      + L  P HT+G I+YY       +P  A+F GDTLF  GCG+ FEG+  QM  SL   L SLP  T +YC HEYT+ NL FALTVE  N                G  TIPS ++ E  TNPF+R D   LQ  V   DP++ L  +R RKD +
Sbjct:   83 DRIPGQTVLLEAGDRLQICGQTAEV-LFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSL-QQLRSLPDDTAIYCAHEYTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPSRLDIEKATNPFLRWDQAALQAAVSSQDPVQTLARLRSRKDQF 258          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNE7 (Hydroxyacylglutathione hydrolase OS=Synechococcus elongatus (strain PCC 7942) GN=gloB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.335e-29
Identity = 75/178 (42.13%), Postives = 94/178 (52.81%), Query Frame = 3
Query:   57 DNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDP--AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            D + G T  +E GD+  I      + L  P HT+G I+YY       +P  A+F GDTLF  GCG+ FEG+  QM  SL   L SLP  T +YC HEYT+ NL FALTVE  N                G  TIPS ++ E  TNPF+R D   LQ  V   DP++ L  +R RKD +
Sbjct:   83 DRIPGQTVLLEAGDRLQICGQTAEV-LFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSL-QQLRSLPDDTAIYCAHEYTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPSRLDIEKATNPFLRWDQAALQAAVSSQDPVQTLARLRSRKDQF 258          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJA (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gloB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.049e-29
Identity = 74/188 (39.36%), Postives = 97/188 (51.60%), Query Frame = 3
Query:   27 PGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            P   VYG   D   + G T +++ G+  +         L  P HT+G ++YY      E   +F GDTLF  GCG+ FEG+ EQM  SL   L  LP+ T+V+C HEYT+ NL FALTV+  N                G PT+PSTI EE  TNPF+R D P L+   G  DP+     +R  KD +
Sbjct:   71 PRAVVYGSQADRGRIPGQTVELQAGETVAFAGR-QAKVLFVPGHTRGHVAYYFP----ESGDLFCGDTLFAGGCGRLFEGTPEQMLGSLD-QLRQLPEATRVWCAHEYTLNNLKFALTVDGDNPDLQARYQQVVALRQAGSPTVPSTIGEERRTNPFLRWDQPALRAATGAQDPVRVFARLRGMKDQF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNY3 (Hydroxyacylglutathione hydrolase OS=Synechocystis sp. (strain PCC 6803) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 75/196 (38.27%), Postives = 101/196 (51.53%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            R +    P ++VYGG  D   + G T  + +GD+ S  A         P HT+G I+YY     GE    +F GDT+F  GCG+ FEG+  QM QS+   L  LP  T+++C HEYT+ NL FALTV+  N                G  TIPS +  E  TNPF+R D P +Q  VG  +P     ++R  KDN+
Sbjct:   64 RELLAKYPNLEVYGGVEDQGRIPGQTVFLRDGDRLSF-ADREATVYFVPGHTRGHIAYYFAPGSGETIGDLFCGDTIFAGGCGRLFEGTPAQMVQSIG-KLRQLPDQTRLWCAHEYTLGNLKFALTVDPSNKDLQERFQTVQGDRQRGQATIPSWLGTEKRTNPFLRWDNPAIQARVGMTEPARVFGKLRGMKDNF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_RHORT (Hydroxyacylglutathione hydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 71/183 (38.80%), Postives = 97/183 (53.01%), Query Frame = 3
Query:   42 YGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKDNW 584
            + G    + G    V  GD+ +IG       + TP HT G I+Y+      E  A+F GDTLF AGCG+ FEGSA QM+ SL   L +LP  T V+CGHEYT  N+ FALT++  N                G PT+P+ + +E  +NPF+R D  + QE  G    DP+E     R +KD++
Sbjct:   80 FAGDAHRLPGIDRTVVEGDRVAIG-QAEARVIETPGHTLGHIAYWFA----ESSALFCGDTLFSAGCGRLFEGSAGQMWDSL-RKLRALPAQTLVFCGHEYTQPNITFALTIDPRNEALRARALEVDALRAAGRPTVPAFLGDEARSNPFLRADSADFQEAFGMTGADPVEVFARTRLKKDHF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_HYPNA (Hydroxyacylglutathione hydrolase OS=Hyphomonas neptunium (strain ATCC 15444) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 71/188 (37.77%), Postives = 100/188 (53.19%), Query Frame = 3
Query:   30 GIKVYG--GPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF-NDPIEALREIRKRKDNW 584
            G K+ G  G  D + G   +V+ GD   +G     + +  P HT G I+++   +E    A F GD +F  GCG+ FEG+ E M++SL   +  LP+ TQ+YC HEYT  N  FA+T+E  N                  PT+P+ +E ELETNPF+R DLPE+Q  +G   +      EIR RKD +
Sbjct:   75 GCKIIGPAGEADKIPGIDRRVKGGDTVELGGATATV-IDVPGHTLGHIAFHFPDQE----AAFVGDAVFALGCGRVFEGTMEMMWESL-KRIKKLPKKTQLYCAHEYTASNAKFAVTIEPENKALKEYVAWIEKRRAEDKPTVPALLERELETNPFLRADLPEMQLAMGHAGNAAATFGEIRGRKDRF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP8 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 8801) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.581e-28
Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            +++  P + +YGG  D  +    QV  + GD+   G  V  + L  P HT+  I+YY   K  ++   +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+V+C HEYT+KNL FALTV+  N+               G  T+PS + EE  TNPF+R D   +Q  +G  DP     ++R  KD +
Sbjct:   66 LQQYFPNLCIYGGSEDRGRIPGQQVFLKEGDRVEFGQRVGEV-LFVPGHTRAHIAYYFPPKLSQETGELFCGDTLFGGGCGRLFEGTPTQMVNSL-TKLRNLPDNTRVWCAHEYTLKNLQFALTVDPDNLVLKNRYHQVKEFRHQGQATVPSILGEEKLTNPFLRWDNSAIQLTIGMTDPARVFGKLRGMKDTF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CYAA5 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain ATCC 51142) GN=gloB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.581e-28
Identity = 73/196 (37.24%), Postives = 101/196 (51.53%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            + + E  P + VYG   D  +    QV  E GD          +    P HT+G I+YY    E E+   +F GDT+F  GCG+ FEG+  QM +S+   L +LP  T+++C HEYT+ NL FA+TV+  N                   T+PS + EE +TNPF+R D P LQ + G NDP     +IR  KDN+
Sbjct:   64 KKLMEQFPDLCVYGSKEDQGRIPGQQVFLEEGDTVEFAGKTGKVYF-VPGHTRGHIAYYFPPNENEEIGDLFCGDTIFAGGCGRLFEGTPAQMVESIG-KLRNLPDHTRIWCAHEYTLNNLKFAVTVDKDNSDLQIRYQDVIKARKNEEATVPSLLGEEKKTNPFLRWDQPALQMITGMNDPARVFGKIRGMKDNF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO21_SCHPO (Probable hydroxyacylglutathione hydrolase C824.07 OS=Schizosaccharomyces pombe GN=SPAC824.07 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.581e-28
Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKD 578
            P +KVYGG   N  G T+  ++ + F +G  V V +LHTPCHT+  I YYV+       AVFTGDTLF +GCG+FFEG A+QM  +L   L +LP  T  Y GHEYT  N  F+ T+ +                  G      TI +E + NPFM + L  +Q+ VG +DPI  ++++R  K+
Sbjct:   80 PSLKVYGGK--NASGVTYTPKDKEIFKVG-EVQVEALHTPCHTQDSICYYVSSPSKR--AVFTGDTLFTSGCGRFFEGDAKQMDYALNHVLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELTKLVDFCKNHESTTG----HFTIGDEKKFNPFMCLGLESVQKAVGSSDPITVMKKLRDMKN 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SHEHH (Hydroxyacylglutathione hydrolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gloB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.511e-28
Identity = 74/201 (36.82%), Postives = 104/201 (51.74%), Query Frame = 3
Query:    3 ERTMKEMVPGIKVYGGPLDNVKGCTHQVE-NGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 584
            E+ +K       VYG  ++N+ G    +  NG+       +N   +  P HT G I Y +      + A+F GDTLF  GCG+ FEG+AEQMYQSL   L  LP  T+V+C HEYT+ NL FA  VEA N                  PT+PS+I  E   NPF+R+D  E+Q+ +         DP+++   +R+ KDN+
Sbjct:   65 EQLLKLFGEDTPVYGPQVENIAGVNRPISTNGNITLENIGLNTTVIQVPGHTSGHICYLI------EDALFCGDTLFSGGCGRLFEGTAEQMYQSL-TQLSLLPDNTRVFCAHEYTLANLHFAKAVEANNPALIEYTVKAHALRAENKPTLPSSIALEKAINPFLRLDSLEIQKSLAVQFQQPIADPVQSFALLRQWKDNF 258          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_SYNP62.335e-2942.13Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNE72.335e-2942.13Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNJA3.049e-2939.36Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNY31.513e-2838.27Hydroxyacylglutathione hydrolase OS=Synechocystis ... [more]
GLO2_RHORT1.513e-2838.80Hydroxyacylglutathione hydrolase OS=Rhodospirillum... [more]
GLO2_HYPNA1.513e-2837.77Hydroxyacylglutathione hydrolase OS=Hyphomonas nep... [more]
GLO2_CYAP82.581e-2837.63Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_CYAA52.581e-2837.24Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO21_SCHPO2.581e-2840.22Probable hydroxyacylglutathione hydrolase C824.07 ... [more]
GLO2_SHEHH7.511e-2836.82Hydroxyacylglutathione hydrolase OS=Shewanella hal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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