CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROM0 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9301) GN=gloB PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 59/179 (32.96%), Postives = 89/179 (49.72%), Query Frame = 3
Query:   51 PLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            P  NV      VE+G+  +I G  V ++ +    HT   I++++ G   E+P +F GDTLF  GCG+ FEG+ +QMY SL   + SLP+ T +YC HEYT  N+L+AL ++  +                   TIP  ++EE++ N F+R               +E    +R  KD W
Sbjct:   90 PFQNVS-----VEDGETLNILGEEVKIIEVLG--HTSSHIAFFLNG---ENPVLFIGDTLFSGGCGRIFEGTYQQMYSSL-ERIKSLPKDTLIYCAHEYTKSNILWALNLKPKDQDLKNKLSEVEKKLSLNKLTIPFLLDEEMKINLFLRA------------KNLEEFTFLRANKDLW 245          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNPX (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain WH8102) GN=gloB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.046e-18
Identity = 59/174 (33.91%), Postives = 87/174 (50.00%), Query Frame = 3
Query:   75 THQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGED--PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            T  V +GD+ ++ G  + VL +    HT   I++ +  +E  D  P VF GDTLF  GCG+ FEG+   M+++L   L  LP+ T+V C HEYT  NLL+A+  +  +                G  ++PS+I EE  +N FMR                E L  +R+ KD+WR
Sbjct:   89 TISVSDGDQVTVLGRSLQVLDV--AAHTSAHIAFVIPEQEDPDLGPVVFCGDTLFSGGCGRLFEGTPADMHRAL-RRLSELPESTKVCCAHEYTEGNLLWAIQQQPQDAAIRQRYDAVVDLRRRGELSLPSSIGEERRSNLFMRA------------ASAEELGRLRRHKDHWR 247          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROM9 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9312) GN=gloB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.046e-18
Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = 3
Query:   84 VENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMR 497
            VE+G+  +I G  + ++ +    HT   I+++V G   E P +F GDTLF  GCG+ FEG+ +QMY SL   + SLP+ T +YC HEYT  NLL+AL ++  +                   TIP  ++EE++ N F+R
Sbjct:   96 VEDGETLNILGEEIKIIEVLG--HTNSHIAFFVNG---ESPVLFIGDTLFSGGCGRIFEGTYQQMYSSL-ERIKSLPKNTLIYCAHEYTKANLLWALNLKPKDQDIKNKLLQVEKKLSINELTIPFLLDEEMKINLFLR 228          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNS9 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain CC9902) GN=gloB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.203e-18
Identity = 58/176 (32.95%), Postives = 84/176 (47.73%), Query Frame = 3
Query:   75 THQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA----VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            T  V +GD  ++ G  + V+ +    HT   I++ +   + +DP+     F GDTLF  GCG+ FEGSA+ MY++L     +LP  T V C HEYT  NL +A      +V               G  ++PS+I  E  TN FM+             +  E L E+R  KD+WR
Sbjct:   89 TRGVADGDVINLLGRRLEVIDV--AAHTSAHIAFIIRNDDDQDPSFGPLAFCGDTLFAGGCGRLFEGSAQDMYRAL-QRFAALPDETLVCCAHEYTEANLRWATEQRPNDVQITTRHQTVKALRSRGDLSLPSSIGAEKRTNLFMQA------------ETAEQLAELRSHKDHWR 249          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNPW (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain WH7803) GN=gloB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17
Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 3
Query:   75 THQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVT---GKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 590
            T  V  G +F++ G  V+V+ +    HT   +++++       G  PA+F GDTLF  GCG+ FEG+ + M+++L  TL +LP+ T++YC HEYT  NL +A  ++  +                   TIPST+ EE  +N F+R                  L  +R+ KD+W+G
Sbjct:   94 TQPVAAGTRFTLLGVPVDVIDVRA--HTSAHLAFFLPEGCSPGGHPPALFCGDTLFSGGCGRLFEGTPDDMHRAL-QTLATLPESTRIYCAHEYTEGNLRWAHALQPEDRAIKARLEDVIALRTQHKLTIPSTLAEEHRSNLFLRA------------QSAAELGRLRQLKDDWKG 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_STRMK (Hydroxyacylglutathione hydrolase OS=Stenotrophomonas maltophilia (strain K279a) GN=gloB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.570e-17
Identity = 57/194 (29.38%), Postives = 95/194 (48.97%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKF-SIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNWR 587
            PG++V     + +   T +V  G++  ++G   +VLS+  P HT+  I+++          +F+GD+LF  GCG+ FEG+  Q+  S+   LG+LP    + C HEYTV N +FA  V+  N                   T+P T+  E + NPF+RV    ++  V  +      D ++ +  +R  KD +R
Sbjct:   69 PGVRVIAPVEERIPTATGRVGEGERVQALGRTFHVLSV--PGHTRSHIAFHTAEH------LFSGDSLFSLGCGRLFEGTPSQLLASM-RKLGTLPAQLLLCCAHEYTVSNAVFARHVDPANAALWQRQEEALAMRRDDRSTLPVTLANEFDCNPFLRVHAAPIRASVSAHLGRDVVDDVDVMAGLRHWKDGFR 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_BLOPB (Hydroxyacylglutathione hydrolase OS=Blochmannia pennsylvanicus (strain BPEN) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17
Identity = 58/190 (30.53%), Postives = 90/190 (47.37%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG----FNDPIEALREIRKRKDNW 584
            P   VYG       G    V  GD F +        L+ P HT G I +Y        P +F GDT+F AGCGK   G A+ MY+S  + +  LP+ T ++ GHEYT+ N+ FA+++   +                  PT+P+T+  EL+ NPF R     +++ +       +  +   E+RK+KD++
Sbjct:   70 PKTIVYGPTETKNNGSHFLVSEGDDFVL-LQKKFKVLNLPGHTPGHIGFYSA------PWLFCGDTVFSAGCGKICIGFAQYMYESF-LKIRYLPRNTLIFSGHEYTLSNVNFAISILPQDQSIINYRNKIIKLYKKKQPTVPTTLNLELKVNPFFRCGNSNIKKSLNLPCDLKEEWQVFSELRKKKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNS3 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain CC9311) GN=gloB PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.567e-17
Identity = 60/176 (34.09%), Postives = 84/176 (47.73%), Query Frame = 3
Query:   75 THQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKE---GEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 590
            T  V +GD+  + G  V V+ +    HT+  I+Y++   E        +F GDTLF  GCG+ FEG+   M+++L   LGSLP  T V C HEYT  NL +A   E  +                G  T+PS+I EE  +N F+R                E L  +R+ KD+WRG
Sbjct:   94 TLSVRDGDEIELLGRPVRVMDVRA--HTRAHIAYWLPQGEISTSLTSVLFCGDTLFSGGCGRLFEGTPADMHRAL-QRLGSLPPETLVCCAHEYTEANLRWAAQQEPDDALITNRLRVVEATRRSGSLTLPSSIAEEWRSNLFLRA------------TSSEELGRLRQHKDSWRG 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ERWCT (Hydroxyacylglutathione hydrolase OS=Erwinia carotovora subsp. atroseptica GN=gloB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.965e-17
Identity = 60/190 (31.58%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVK-GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDP-----IEALREIRKRKD 578
            P + V+G P +  K G T+ VE G+  S+  +     +  P HT G I+YY        P +F GDTLF AGCG+ FEG+ +QMY+S+   +  LP  T V C HEYT+ NL F+  +   +                   ++P+T+  E   N F+R    +L+  +  N+P      +  + +R +KD
Sbjct:   70 PNLPVFG-PKETAKCGATYLVEEGNTVSL-LNSEFSVIEVPGHTSGHIAYY------NAPFLFCGDTLFSAGCGRIFEGTPKQMYESI-QKIAELPDDTVVCCAHEYTLSNLRFSNDIWPEDPDIESYLHKISQIREKSQSSLPTTLGLERRINLFLRCHEIDLKRKIS-NEPENIENWQVFKMLRSKKD 249          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO4_YEAST (Hydroxyacylglutathione hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=GLO4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.791e-17
Identity = 57/172 (33.14%), Postives = 87/172 (50.58%), Query Frame = 3
Query:   33 IKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSL-CVTLGSLPQ----PTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXG-LPTIPSTIEEELETNPFMRVDLPELQELVG 530
            IK+ GG   +  G T   +N  ++ +G ++ V  + TPCHTK  I YY+   E  +  +FTGDTLF+AGCG+FFEG+   M  +L  + L ++ +      ++Y GHEYT  N+ F       ++                   T   T+ +EL  NPFMR+D   ++  VG
Sbjct:   94 IKIIGGSKSS-PGVTEVPDNLQQYHLG-NLRVTCIRTPCHTKDSICYYIKDLETGEQCIFTGDTLFIAGCGRFFEGTGRDMDMALNQIMLRAVGETNWNKVKIYPGHEYTKGNVSFIRAKIYSDIGQNKEFDALEQYCKSNECTTGHFTLRDELGYNPFMRLDDRAVRLAVG 263          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_PROM04.131e-1832.96Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_SYNPX7.046e-1833.91Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_PROM97.046e-1837.41Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_SYNS99.203e-1832.95Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNPW1.202e-1731.82Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_STRMK1.570e-1729.38Hydroxyacylglutathione hydrolase OS=Stenotrophomon... [more]
GLO2_BLOPB2.678e-1730.53Hydroxyacylglutathione hydrolase OS=Blochmannia pe... [more]
GLO2_SYNS34.567e-1734.09Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_ERWCT5.965e-1731.58Hydroxyacylglutathione hydrolase OS=Erwinia caroto... [more]
GLO4_YEAST7.791e-1733.14Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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