CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_HERAR (Hydroxyacylglutathione hydrolase OS=Herminiimonas arsenicoxydans GN=gloB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23
Identity = 70/196 (35.71%), Postives = 98/196 (50.00%), Query Frame = 3
Query:   33 IKVYGGPLDNVKGCTHQVENGDKFSI---GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQE------LVGFND--PIEALREIRKRKDNWR 587
            + V+    D +   +H +++GD   I     H++VL++  P HT G I+Y       E   +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT+ NL FAL  E  N                 +PT+PSTI  E  TNPF+R   P + +       V  ND  P+     +R  K+++R
Sbjct:   71 VPVFAPRKDPIANVSHPLDDGDTVHIPELDLHLSVLAV--PGHTLGHIAYVAA----EQGWLFCGDTLFAGGCGRLFEGTPTQMLTSL-EKLAALPDDTKVYCAHEYTISNLRFALAAEPDNAALAIRFKAEQAKREADIPTVPSTIGLEKSTNPFLRAREPAIADQLIAAGRVNENDKGPVAVFAALRAWKNDFR 259          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_YERPY (Hydroxyacylglutathione hydrolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 68/195 (34.87%), Postives = 96/195 (49.23%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEAL----REIRKRKDNW 584
            ++   P I VYG      KG T  V +GD  +I    N   +  P HT G I+YY        P +F GDTLF AGCG+  EG+ EQMY S+   L  LP  T + C HEYT+ NL FA  +   +                 LP++P  ++ E + N F+R +  +LQ  +G   P ++L     E+R RKD++
Sbjct:   65 LRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQ-NYTIIAVPGHTLGHIAYY------SSPYLFCGDTLFSAGCGRLLEGTPEQMYASI-QRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFERKINVFLRCNDIDLQRKIGITSPPDSLVSVFCELRSRKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_YERPS (Hydroxyacylglutathione hydrolase OS=Yersinia pseudotuberculosis GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 68/195 (34.87%), Postives = 96/195 (49.23%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEAL----REIRKRKDNW 584
            ++   P I VYG      KG T  V +GD  +I    N   +  P HT G I+YY        P +F GDTLF AGCG+  EG+ EQMY S+   L  LP  T + C HEYT+ NL FA  +   +                 LP++P  ++ E + N F+R +  +LQ  +G   P ++L     E+R RKD++
Sbjct:   65 LRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQ-NYTIIAVPGHTLGHIAYY------SSPYLFCGDTLFSAGCGRLLEGTPEQMYASI-QRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFERKINVFLRCNDIDLQRKIGITSPPDSLVSVFCELRSRKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_YERPB (Hydroxyacylglutathione hydrolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 68/195 (34.87%), Postives = 96/195 (49.23%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEAL----REIRKRKDNW 584
            ++   P I VYG      KG T  V +GD  +I    N   +  P HT G I+YY        P +F GDTLF AGCG+  EG+ EQMY S+   L  LP  T + C HEYT+ NL FA  +   +                 LP++P  ++ E + N F+R +  +LQ  +G   P ++L     E+R RKD++
Sbjct:   65 LRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQ-NYTIIAVPGHTLGHIAYY------SSPYLFCGDTLFSAGCGRLLEGTPEQMYASI-QRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFERKINVFLRCNDIDLQRKIGITSPPDSLVSVFCELRSRKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_YERP3 (Hydroxyacylglutathione hydrolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 68/195 (34.87%), Postives = 96/195 (49.23%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEAL----REIRKRKDNW 584
            ++   P I VYG      KG T  V +GD  +I    N   +  P HT G I+YY        P +F GDTLF AGCG+  EG+ EQMY S+   L  LP  T + C HEYT+ NL FA  +   +                 LP++P  ++ E + N F+R +  +LQ  +G   P ++L     E+R RKD++
Sbjct:   65 LRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQ-NYTIIAVPGHTLGHIAYY------SSPYLFCGDTLFSAGCGRLLEGTPEQMYASI-QRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFERKINVFLRCNDIDLQRKIGITSPPDSLVSVFCELRSRKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_XANAC (Hydroxyacylglutathione hydrolase OS=Xanthomonas axonopodis pv. citri GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELV------GFNDPIEALREIRKRKDNWR 587
            +++  P + ++G   + +    H V  G++  +   V    +  P HT+  I++   G       +F+GDTLF  GCG+ FEG+A QM+ SL   L SLP  T V CGHEYT+ N  FAL V+  N                  PT+P +++ EL TNPF+R   PE++  V        +  ++   E+R+ KD +R
Sbjct:   65 LQQRWPDLALFGPADERIPTNAHHVGRGERLRL-LDVEFQVIKVPGHTRSHIAFLADGH------LFSGDTLFSLGCGRMFEGTAPQMFDSL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRTSHPEIRAAVAPRAASALSSEVDIFAELRRWKDEFR 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_VIBFM (Hydroxyacylglutathione hydrolase OS=Vibrio fischeri (strain MJ11) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 67/190 (35.26%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF----NDPIEALREIRKRKDNW 584
            P + V G   + +   TH V +GD   +      + L  P HT G ++Y        D  +F GD LF AGCG+ FEG+AEQM+ SL   + +LP  T+VYC HEYT  NL FAL VE  N                G  TIPST++ E   NPF+R     +++ V      +  +E    +R+ KD +
Sbjct:   71 PSVNVVGPENEPIPTLTHPVGDGDFVELFDE-QFMVLGVPGHTNGHVAYV------GDEKLFCGDALFSAGCGRLFEGTAEQMFNSL-QKMAALPDETEVYCAHEYTASNLAFALAVEPDNDYLLRYREKVLHLRAHGKSTIPSTLQREKLINPFLRTSEANVKKSVASKVQDSTEVEIFTALRRWKDEF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_VIBF1 (Hydroxyacylglutathione hydrolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gloB PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 67/190 (35.26%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF----NDPIEALREIRKRKDNW 584
            P + V G   + +   TH V +GD   +      + L  P HT G ++Y        D  +F GD LF AGCG+ FEG+AEQM+ SL   + +LP  T+VYC HEYT  NL FAL VE  N                G  TIPST++ E   NPF+R     +++ V      +  +E    +R+ KD +
Sbjct:   71 PNVNVVGPENEPIPTLTHPVGDGDFVELFDE-QFMVLGVPGHTNGHVAYI------GDEKLFCGDALFSAGCGRLFEGTAEQMFNSL-QKMAALPDETEVYCAHEYTASNLAFALAVEPDNDYLLRYREKVLHLRAHGKSTIPSTLQREKLINPFLRTSEANVKKSVASKVQDSTEVEIFTALRRWKDEF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SHESA (Hydroxyacylglutathione hydrolase OS=Shewanella sp. (strain ANA-3) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 68/160 (42.50%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   33 IKVYGGPLDNVKGCTHQVEN--GDKFS---IGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMR 497
            + VYG   ++++G    +E    D  +   I A V +LS+  P HT G I+Y V      D A+F GDTLF AGCG+ FEG+  QM+QSL + L +LP  T+VYC HEYT+ NL FA TV+  N                G  TIPSTI  E   NPF+R
Sbjct:   79 LAVYGPQSEDIQGINQPIEPTLSDSLTLPFIDAPVRILSV--PGHTAGHIAYLV------DDALFCGDTLFSAGCGRLFEGTPSQMWQSLSL-LAALPDETRVYCAHEYTLSNLKFAQTVDTDNEALNAYVEEASTLRAQGKATIPSTIGLERAINPFLR 229          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CUPTR (Hydroxyacylglutathione hydrolase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gloB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 73/195 (37.44%), Postives = 97/195 (49.74%), Query Frame = 3
Query:   45 GGPL-------DNVKGCTHQVENGDKFSIGAHVNVLS-LHTPCHTKGRISYYVT-GKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN-----DPIEALREIRKRKDNWR 587
            GGPL       + + G T  +  GD  ++ A    L  L  P HT G I+Y    G+ G  PA+F GDTLF +GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT  N+ FA  VE GN                  PT+P+TI  E + NPF+R   P ++  V  +     D  +    +R  KDN+R
Sbjct:   75 GGPLPVLGPAGERIGGRTQALREGDVATLEAPALTLRVLDVPGHTAGHIAYVADLGEAG--PALFCGDTLFASGCGRLFEGTPAQMLASL-DKLAALPGDTRVYCAHEYTRSNVRFARAVEPGNAALAAWEARVEALRATNQPTLPTTIAHERQVNPFLRSREPAVRAAVSAHGGTAADDAQNFGALRGWKDNFR 266          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_HERAR1.466e-2335.71Hydroxyacylglutathione hydrolase OS=Herminiimonas ... [more]
GLO2_YERPY1.914e-2334.87Hydroxyacylglutathione hydrolase OS=Yersinia pseud... [more]
GLO2_YERPS1.914e-2334.87Hydroxyacylglutathione hydrolase OS=Yersinia pseud... [more]
GLO2_YERPB1.914e-2334.87Hydroxyacylglutathione hydrolase OS=Yersinia pseud... [more]
GLO2_YERP31.914e-2334.87Hydroxyacylglutathione hydrolase OS=Yersinia pseud... [more]
GLO2_XANAC1.914e-2332.32Hydroxyacylglutathione hydrolase OS=Xanthomonas ax... [more]
GLO2_VIBFM1.914e-2335.26Hydroxyacylglutathione hydrolase OS=Vibrio fischer... [more]
GLO2_VIBF11.914e-2335.26Hydroxyacylglutathione hydrolase OS=Vibrio fischer... [more]
GLO2_SHESA1.914e-2342.50Hydroxyacylglutathione hydrolase OS=Shewanella sp.... [more]
GLO2_CUPTR1.914e-2337.44Hydroxyacylglutathione hydrolase OS=Cupriavidus ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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