CF834779

Overview
NameCF834779
Unique NameCF834779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5657 contig Csv1_Contig5657:843..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834779 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.860e-12
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = -1 
Query:  330 RSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIR--PDSVIGEGDAP----AELVEGTKERGHLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFV 674
            RSV+Y SFGS      +++ +   GL+ ++  F+W  R  PD  +   +A     AE +E   +   +  WVPQ ++L H ++ GFL+H GW S +E +V GVP+I  P   +Q  N++ V
Sbjct:  259 RSVVYASFGSEYFPSTDEIHDIAIGLLLTEVNFIWAFRLHPDEKMTIEEALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMVFGVPIIGVPMAYEQPSNAKVV 379
The following BLAST results are available for this feature:
BLAST of CF834779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
FLRT_CITMA1.860e-1234.71Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834779 ID=CF834779; Name=CF834779; organism=Citrus sinensis; type=EST; length=674bp
TTTTTTTTTTTTACATATAACATTAATTTTTATTGATAAGAATCCCTTAA
CTTTAAAATTTATTTAATCTAGCAGTAACATCTTGCACTAACCTTAGCTA
TATGTTTTCATGCTTGGGAGCTCATCATCTTAATATCATCAATCAGACGG
TCCAAATTACAATAAGATGGTCCACCTTCATTAGCAGTGGTTCTAGCCAT
TGTAGCCATCCGATCAGCTGCTCTCATAAACTCCTCCTTCCTCTCCACCA
TGAGATCATTCACCATTTTCTCAACAACATTTCTATCGCACACATCCTTC
ATATCCAATCCAAGATTCCACACTTCACTCACAAACCTACTATTGATCTG
TTGATCAGCAAAGTAAGGCCAGCAAATCATTGGCACCCCGGCTACTATAC
TCTCCAATGTTGAGTTCCAGCCGCTGTGTGTCAAGAATCCAGCCACAGCC
TGGTGAGCCAGTACCTCCTCCTGTGGAACCCAACTAACCAAATGACCTCT
CTCCTTCGTGCCCTCCACAAGCTCTGCCGGGGCGTCACCTTCGCCAATCA
CAGAATCTGGCCTAATGACCCACAAGAACCGCTGCTTACTGTCTACAAGA
CCGTGCCAAAACTCAATCAGCTGTTCCCTTTTCAACAGTGTAATGCTACC
AAAGCTTACGTACAGTACAGACCG
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