CF834822

Overview
NameCF834822
Unique NameCF834822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1296..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.712e-13
Identity = 37/87 (42.53%), Postives = 48/87 (55.17%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VK+ GYN+  G+ V +N WAI RDPA W  +             +D  G D   +PFGSGRRICPGI L + LV   + +L+  F W
Sbjct:  376 VKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDW 462          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.542e-13
Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = -2
Query:   66 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXE--DIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 311
            + GY+V+KG+ +  N+W I  DP  W +              DID+KGH + LLPFGSGRR+CPGI  G+  V   L   LH F
Sbjct:  400 LGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSF 483          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.626e-13
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = -2
Query:   66 KISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 314
            KI+GY++  G+ V+VN WA+ RD  +W  N           +++D KG DY  +PFGSGRR+CPG++LG  ++     +LL  F
Sbjct:  380 KIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSF 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.626e-13
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +I+GY++   S V VN WAIGRDP  W               I+ K + +  +PFG+GRR+CPG+  G++ V  +L  L++HF W
Sbjct:  376 EINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDW 460          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.626e-13
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VK+ GY++     + VN WAIGRDP  W +             +D +G  + LLPFGSGRRICPG+ +G+  +   L +LL+ F W
Sbjct:  382 VKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDW 467          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.626e-13
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V++ GY+V  G++V +N WAIGRDP  W               +D KG D+ L+PFG+GRR CPG    +  +   L +L+  F W
Sbjct:  385 VEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDW 470          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.041e-13
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +I+GY +   + + +N WAIGR+P  W               ID +G D+  +PFG+GRRICPGI   I  +   L  LL+HF W
Sbjct:  390 QINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDW 474          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.890e-13
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXED----IDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +I+GY++ KGS +  N+WAI RDP  W +                 +D+KG D+ L+PFG+GRRIC G+ LG+  +  +   L+  F W
Sbjct:  380 EINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDW 468          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.030e-12
Identity = 30/85 (35.29%), Postives = 48/85 (56.47%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +++GY +   + + +NVW++GR+P  W+               D  G+D+  +PFG+GRRICPG+  G+  V   L  LL+HF W
Sbjct:  378 EVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDW 462          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.030e-12
Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXE----DIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +I GY V  G+ V V+ WA+GRD   W+            E    D+ MKG D   +PFGSGRRICPG+  G   +  ML +L++HF W
Sbjct:  415 EIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDW 503          
The following BLAST results are available for this feature:
BLAST of CF834822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
C71AC_ARATH2.712e-1342.53Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN3.542e-1342.86Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C83A1_ARATH4.626e-1340.48Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71D9_SOYBN4.626e-1338.82Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BH_ARATH4.626e-1340.70Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71A8_MENPI4.626e-1338.37Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71DA_SOYBN6.041e-1338.82Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
F3PH_ARATH7.890e-1337.08Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71DD_MENPI1.030e-1235.29Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71C2_MAIZE1.030e-1241.57Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834822 ID=CF834822; Name=CF834822; organism=Citrus sinensis; type=EST; length=318bp
CACACGAGTTCCCGGAGCATATCAATATTCCTCAGGCTTCACTTCCTTTA
CCTCGGTGCCCACCAAAAATGGTGCAAAAGATGACCCAACATCGAGGTCA
CTAAATTTATGCCAAGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCA
AATGGTAACAATCAATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAA
TAACCTCTCAGGCCTAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTC
TGCCTATGGCCCAAACGTTTACATGTACCACTGATCCTTTCTGAACGTTG
TAGCCGCTGATTTTTACA
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