CF834827

Overview
NameCF834827
Unique NameCF834827
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_SALTY (NADH-quinone oxidoreductase subunit G OS=Salmonella typhimurium GN=nuoG PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.814e-22
Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKP-----VASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG   ++     +LQAC   G+DIP FC+H  L   G CR C V+  ++ +      V SC  PA  G  I  D   AK+ RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYEVNGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPATDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_SALTI (NADH-quinone oxidoreductase subunit G OS=Salmonella typhi GN=nuoG PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.814e-22
Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKP-----VASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG   ++     +LQAC   G+DIP FC+H  L   G CR C V+  ++ +      V SC  PA  G  I  D   AK+ RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYEVNGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPATDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_PSEPK (NADH-quinone oxidoreductase subunit G OS=Pseudomonas putida (strain KT2440) GN=nuoG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.675e-22
Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLV-----EVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG  L++     +LQAC   G+DIP FC+H  L   G CR C V     E +   + V SC  PA  G  I  D   +K  R  V+E+L+ NHP DCP+C++GG C LQD ++  G +  R+   KR+  +++LG
Sbjct:    4 IHVDGKALEVNGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTRGRIVMSCMTPASDGTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFTKRTHQNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_YERPE (NADH-quinone oxidoreductase subunit G OS=Yersinia pestis GN=nuoG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSP-----KPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG    +     +LQAC   G+DIP FC+H  L   G CR C V+  ++      + V SC  PA  G  I  D   AK  RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYDVNGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNADDTRGRLVMSCMTPATDGTFISIDDSEAKAFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHQNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_SHIFL (NADH-quinone oxidoreductase subunit G OS=Shigella flexneri GN=nuoG PE=3 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKP-----VASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG   ++     +L+AC   G+DIP FC+H  L   G CR C V+  ++ +      V SC  PA  G  I  D   AK+ RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_ECOLI (NADH-quinone oxidoreductase subunit G OS=Escherichia coli (strain K12) GN=nuoG PE=1 SV=4)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKP-----VASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG   ++     +L+AC   G+DIP FC+H  L   G CR C V+  ++ +      V SC  PA  G  I  D   AK+ RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_ECOL6 (NADH-quinone oxidoreductase subunit G OS=Escherichia coli O6 GN=nuoG PE=3 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKP-----VASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG   ++     +L+AC   G+DIP FC+H  L   G CR C V+  ++ +      V SC  PA  G  I  D   AK+ RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_ECO57 (NADH-quinone oxidoreductase subunit G OS=Escherichia coli O157:H7 GN=nuoG PE=3 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKP-----VASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            + VDG   ++     +L+AC   G+DIP FC+H  L   G CR C V+  ++ +      V SC  PA  G  I  D   AK+ RE V+E+L+ NHP DCP+C++GG C LQD ++  G    R+   KR+  +++LG
Sbjct:    4 IHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_SHEON (NADH-quinone oxidoreductase subunit G OS=Shewanella oneidensis GN=nuoG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 2 
Query:  215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEV-----EKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613
            ++VDG   ++     +LQAC   G+D+P FC+H  L   G CR C V+      +K  + V SC  P+  G  I  +   AK+ R+ V+E+ + NHP DCP+C++GG C LQD ++  G +  R+   KR+  +++LG
Sbjct:    4 IYVDGKEYEVDGADNLLQACLSLGLDVPYFCWHPALGSVGACRQCAVKQYQNADDKRGRLVMSCMTPSTDGTYISIEDEEAKEFRKCVVEWQMTNHPHDCPVCEEGGACHLQDMTVMTGHNSRRYRFTKRTHQNQDLG 141
[Close]
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NQO3_THET8 (NADH-quinone oxidoreductase subunit 3 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo3 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 2 
Query:  209 IEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLV---------------------EVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFG 556
            + V V+   +++P G +V+ A   AG D+P FC    LS  G CRMCLV                     E++  PK  ASC      GM + T + + ++A+ G++EF L+NHPLDCP CD+GG C+LQD+++ +G
Sbjct:    2 VRVKVNDRIVEVPPGTSVMDAVFHAGYDVPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVTAVADGMVVDTLSDVVREAQAGMVEFTLLNHPLDCPTCDKGGACELQDRTVEYG 138
The following BLAST results are available for this feature:
BLAST of CF834827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
NUOG_SALTY2.814e-2239.13NADH-quinone oxidoreductase subunit G OS=Salmonell... [more]
NUOG_SALTI2.814e-2239.13NADH-quinone oxidoreductase subunit G OS=Salmonell... [more]
NUOG_PSEPK3.675e-2239.13NADH-quinone oxidoreductase subunit G OS=Pseudomon... [more]
NUOG_YERPE8.188e-2239.13NADH-quinone oxidoreductase subunit G OS=Yersinia ... [more]
NUOG_SHIFL8.188e-2238.41NADH-quinone oxidoreductase subunit G OS=Shigella ... [more]
NUOG_ECOLI8.188e-2238.41NADH-quinone oxidoreductase subunit G OS=Escherich... [more]
NUOG_ECOL68.188e-2238.41NADH-quinone oxidoreductase subunit G OS=Escherich... [more]
NUOG_ECO578.188e-2238.41NADH-quinone oxidoreductase subunit G OS=Escherich... [more]
NUOG_SHEON2.382e-2136.23NADH-quinone oxidoreductase subunit G OS=Shewanell... [more]
NQO3_THET82.382e-2137.23NADH-quinone oxidoreductase subunit 3 OS=Thermus t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834827 ID=CF834827; Name=CF834827; organism=Citrus sinensis; type=EST; length=614bp
AATGGGGTTAGGGTTGTTAGCATCGAGGGCGATGAGACCCCATAAGAATT
CAAACTCCAGAGTNTTTATCCGGTCCATCGCCTTCAAACCGGAGCTCCAA
TCACCCGAAGCTTCTTCAGCAGCAGCGGCTACAGCGCTCGAACCGGATCT
CCCCCCTCGATCGCCCGTGGGTGGGGCCCGGGTCCATTTCCCCAACCCTG
AAGATGCAATCGAAGTGTTCGTCGATGGTTACCCGCTCAAAATCCCCAAG
GGCTTCACCGTTTTGCAGGCCTGTGAGGTCGCCGGCGTTGACATTCCTAG
ATTTTGTTATCACAGTAGACTTTCGATTGCCGGAAATTGCCGAATGTGTC
TCGTTGAAGTCGAGAAATCGCCCAAACCTGTTGCTTCTTGCGCCATGCCT
GCTCTTCCCGGAATGAAAATTAAGACGGATACACCGTTAGCTAAGAAGGC
GAGAGAAGGGGTGATGGAGTTTTTGTTAATGAATCATCCTTTGGATTGTC
CAATTTGTGATCAGGGTGGTGAATGTGATCTCCAGGATCAGTCTATGGCT
TTCGGTTCTGATCGTGGCCGCTTCACTGAAATGAAAAGATCTGTTGTTGA
TAAGAATCTTGGTC
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