CF834827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_PSESM (NADH-quinone oxidoreductase subunit G OS=Pseudomonas syringae pv. tomato GN=nuoG PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.064e-21 Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 215 VFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLV-----EVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 + VDG L++ +LQAC G+DIP FC+H L G CR C V E + + V SC PA I + +K R V+E+L+ NHP DCP+C++GG C LQD ++ G + R+ KR+ ++ LG Sbjct: 4 IHVDGKALEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTRGRIVMSCMTPATDNTWISIEDDESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFTKRTHQNQELG 141
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_BUCAP (NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Schizaphis graminum GN=nuoG PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.664e-20 Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 212 EVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLV-----EVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +++VDG + + +LQAC +G++IP FC+H L G CR C V ++ K + SC P + G I + +KK R ++E LL NHP DCP+C++GG C LQD ++ + + KR+ ++ LG Sbjct: 3 KIYVDGKAYCMSESDNLLQACLSSGLNIPYFCWHPILGSLGACRQCAVTQYNSSLDNQGKLIMSCMTPVIDGTIISINDDTSKKFRSNIVELLLTNHPHDCPVCEEGGNCHLQDMTVMTTHNFRNYRFSKRTHKNQYLG 141
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_BUCAI (NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=nuoG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17 Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 212 EVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEV-----EKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +++VD + + +LQAC G++IP FC+H L G CR C V ++ + + SC P G I + ++ R ++E LL NHP DCP+C++GG C LQD ++ + KR+ ++ LG Sbjct: 3 KIYVDSKIYNVNESDNLLQACLSVGINIPYFCWHPLLGSLGACRQCAVTQYDNFQDRKGRLIMSCMTPVTDGAIISIKSTESEVFRSAIVELLLTNHPHDCPVCEEGGHCHLQDMTVMVKHSMRNYRFKKRTHKNQYLG 141
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NUOG_BLOFL (NADH-quinone oxidoreductase subunit G OS=Blochmannia floridanus GN=nuoG PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.768e-16 Identity = 42/147 (28.57%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 209 IEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKS------------PKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 I ++++ + VL+ C G ++P FC+H L G+CR C V++ + + V SC P + M I ++ R+ ++E L++NHP DCP+C++GG C LQD ++ R+ KR+ ++ LG Sbjct: 3 IPIYIEEKKYMVEDTKNVLEVCLSLGFNVPYFCWHPALGSIGSCRQCAVKLYDNLHCVPDSKHINFGRLVMSCMTPVIKDMYISLFDKELQEFRKNILELLMVNHPHDCPVCEEGGNCHLQDMAVMVEHTYRRYRFTKRTHYNQYLG 149 The following BLAST results are available for this feature:
BLAST of CF834827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834827 ID=CF834827; Name=CF834827; organism=Citrus sinensis; type=EST; length=614bpback to top |