CF834842

Overview
NameCF834842
Unique NameCF834842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KC2D2_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 2 chain OS=Danio rerio GN=camk2d2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPS----HLSPGARDLIPRMLIVDPMKRITIPEIRQHPW 229
            +W+CGVILY L  G  PF DE+   L+++IK G Y  PS     ++P A+DLI +ML ++P KRIT  E  +HPW
Sbjct:  196 MWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAPKHPW 270          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KC2D1_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 1 chain OS=Danio rerio GN=camk2d1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPS----HLSPGARDLIPRMLIVDPMKRITIPEIRQHPW 229
            +W+CGVILY L  G  PF DE+   L+++IK G Y  PS     ++P A+DLI +ML ++P KRIT  E  +HPW
Sbjct:  196 MWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITAAEALKHPW 270          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 2
Query:   20 WSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQ 235
            WSCGVILY L  G LPFD+ ++  L+ KI+   Y+ P+    GA+ LI R+L  +P KRI I EIR   WF+
Sbjct:  196 WSCGVILYVLLAGYLPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRILDPNPDKRIRIEEIRNDEWFK 267          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: SRK2H_ARATH (Serine/threonine-protein kinase SRK2H OS=Arabidopsis thaliana GN=SRK2H PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKK----IKGGIYTLPS--HLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVP 265
            VWSCGV LY +  G  PF+D + P  F+K    I    Y +P   H+S   R L+ R+ + +  KRIT+ EI++HPW+  +LP+ L  P
Sbjct:  183 VWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEP 271          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: SMK4A_MOUSE (Sperm motility kinase 4A OS=Mus musculus GN=Smok4a PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLL 409
            VW  GV+LY +  G + FD  +I  L K+I  G  ++P  LS   +DLI  ++  +P  R T+ E+  HPW       +   P P   Q + K D  I+K +  +GF   ++ +SLR R  NE   +Y LL
Sbjct:  185 VWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKCSVPCRLSVELQDLIRLLMTDNPELRPTVAEVMVHPWVTEGSGVF---PDPCEEQISLKPDPAIVKAMGYIGFRAQEIEDSLRQRKFNETMASYCLL 312          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGI----YTLPSHL--SPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLP 247
            VWSCGV LY +  G  PF+D + P  F+K    I    Y++P ++  S   R L+ R+ + +P +RITIPEI+ HPWF  +LP
Sbjct:  183 VWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHLLSRIFVGNPEQRITIPEIKNHPWFLKNLP 265          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: PPK25_SCHPO (Serine/threonine-protein kinase ppk25 OS=Schizosaccharomyces pombe GN=ppk25 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAH-LPRYLAVP 265
            VWS GV++Y + CG +PFDD ++P L  KIK G    PS++S     LI  ML V+P KR ++ +  + PW + +    YL +P
Sbjct:  234 VWSLGVVIYVMVCGRVPFDDVSVPMLHSKIKSGKLEFPSYISEDCCSLIAAMLNVNPRKRCSLEQAAKFPWLKKNSFCLYLPIP 317          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPKC_ORYSJ (CBL-interacting protein kinase 12 OS=Oryza sativa subsp. japonica GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQ 235
            +WSCGVIL+AL  G LPF D NI  L++KI  G +  P   S     LI R+L  +P  RIT+PEI +  WF+
Sbjct:  229 IWSCGVILFALMAGYLPFHDHNIMVLYRKIYNGEFRCPRWFSKDFTRLITRLLDANPKTRITVPEIIESDWFK 301          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLR 367
            +WSCGVIL+ L  G LPF+D N+ +L+KKI    ++ PS  S  A+ LI ++L  +P  RITI E+  + WF+          PP        +D+  +  +     DQ QLV   R
Sbjct:  197 LWSCGVILFVLMAGYLPFEDSNLMSLYKKIFKADFSCPSWFSTSAKKLIKKILDPNPSTRITIAELINNEWFKK------GYQPPRFETADVNLDD--INSIFNESGDQTQLVVERR 305          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKI-DEEILKEVVKMGFDQNQLVESL 364
            VWSCGV+LY L  G LPF ++N+  +++KI  G +  P+   P  + L+ R+L  +P  RI I +I ++ WFQ    +      P++ Q    I D      V  M ++   L+ SL
Sbjct:  195 VWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKIETPKSPESHQIDSLISDVHAAFSVKPMSYNAFDLISSL 311          
The following BLAST results are available for this feature:
BLAST of CF834842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
KC2D2_DANRE2.069e-1248.00Calcium/calmodulin-dependent protein kinase type I... [more]
KC2D1_DANRE2.069e-1248.00Calcium/calmodulin-dependent protein kinase type I... [more]
CIPK8_ORYSJ2.702e-1248.61CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
SRK2H_ARATH3.529e-1240.45Serine/threonine-protein kinase SRK2H OS=Arabidops... [more]
SMK4A_MOUSE3.529e-1234.35Sperm motility kinase 4A OS=Mus musculus GN=Smok4a... [more]
SAPK1_ORYSJ3.529e-1243.37Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]
PPK25_SCHPO3.529e-1240.48Serine/threonine-protein kinase ppk25 OS=Schizosac... [more]
CIPKC_ORYSJ3.529e-1247.95CBL-interacting protein kinase 12 OS=Oryza sativa ... [more]
CIPKN_ORYSJ4.609e-1235.90CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPKK_ARATH4.609e-1233.33CBL-interacting serine/threonine-protein kinase 20... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834842 ID=CF834842; Name=CF834842; organism=Citrus sinensis; type=EST; length=715bp
CTGGGCCTGACTTTATGTGTGGAGTTGTGGTGTTATATTGTATGCTCTTC
CCTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCCAACCTTTTTAAG
AAAATTAAGGGTGGGATATACACTCTGCCCAGTCATTTGTCTCCGGGTGC
AAGAGATTTGATCCCAAGGATGCTTATAGTTGATCCAATGAAACGAATCA
CCATTCCTGAGATACGTCAGCACCCATGGTTCCAAGCCCATCTTCCGCGT
TATTTAGCTGTGCCCCCTCCAGATACGATGCAACAAGCAAAAAAGATTGA
TGAGGAGATTCTTAAGGAAGTGGTTAAGATGGGATTTGACCAGAACCAAC
TGGTTGAATCTCTTCGCAATAGGTTACAAAACGAGGCTACTGTTGCATAC
TATTTGCTGTTGGACAACCGATTCCGTGTTTCCAGTGGCTACCTTGGAGC
CGAGTTTCAGGAAACTATGGAATCTGGTTTCAACCGTTTGCATCCCATTG
AACCTGCTGTATCACCTGTTGCACACCGTGCTCCAGGATTCATGGATTAT
CAAGGAATGGGTTTAAGAGGACAGTTGCCATATGAAAGGAAATGGGCTCT
TGGACTACAGTCTCGAGCCCATCCACGTGAAATAATGACAGAAGTTCTGA
AAGCTTTGCAAGAACTGAATGTGGGTTGGAAGAAGATTGGGCACTATAAC
ATGAAGTGCAGATGG
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