CF834842

Overview
NameCF834842
Unique NameCF834842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CSKP_HUMAN (Peripheral plasma membrane protein CASK OS=Homo sapiens GN=CASK PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLP----SHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKID 301
            VW CGVIL+ L  G LPF       LF+ I  G Y +     SH+S  A+DL+ RML++DP +RIT+ E   HPW +        +  P+T++Q +K +
Sbjct:  202 VWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFN 299          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 32/94 (34.04%), Postives = 51/94 (54.26%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKI 298
            +WSCGVIL+ L  G LPF D N+  +++KI  G    P   +   R L+ R+L  +P  RIT+ ++ +HPWF+      + +  P+     K +
Sbjct:  195 IWSCGVILFVLLAGYLPFHDSNLMEMYRKISKGDVKFPQWFTTDVRRLLSRLLDPNPNIRITVEKLVEHPWFKKGYKPAVMLSQPNESNNLKDV 288          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KIN4_YEAST (Serine/threonine-protein kinase KIN4 OS=Saccharomyces cerevisiae GN=KIN4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDEN-------IPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPP 268
            VWSCGVILYA+  G LP+DD++       I  L+K I       P +++P  RDL+ R+L+ +P +RI +  I++H W + H   +L++ P
Sbjct:  235 VWSCGVILYAMLAGYLPWDDDHENPTGDDIARLYKYITQTPLKFPEYITPIPRDLLRRILVPNPRRRINLQTIKRHVWLKPH-EAFLSIQP 324          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQ 349
            VWSCGVIL+ L  G LPFD+ N+  L+K+I    ++ P   S GA+ +I R+L  +P+ RI+I E+ +  WF+          PP   Q     DE+I  + V   F  ++
Sbjct:  203 VWSCGVILFVLMAGYLPFDEPNLMTLYKRICKAEFSCPPWFSQGAKRVIKRILEPNPITRISIAELLEDEWFKK------GYKPPSFDQD----DEDITIDDVDAAFSNSK 303          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPKM_ORYSJ (CBL-interacting protein kinase 22 OS=Oryza sativa subsp. japonica GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQ 235
            VWSCGV+L+ L  G LPF+D N+  +++KI    +  P   S   R LI RML  +P  RI I EI  HPW Q
Sbjct:  230 VWSCGVVLFVLTAGYLPFNDGNLMAMYRKICAAKFRCPKWCSQELRSLIGRMLDPEPDTRIKIGEIFDHPWLQ 302          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAIP_WHEAT (Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGI----YTLPSHL--SPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLP--------RYLAVPPPDTMQQAKKIDEEILKEVVKMG 334
            VWSCGV LY +  G  PF+D + P  F+K    I    Y++P ++  S     L+ R+ + +P +RITIPEI+ HPWF   LP        R + +   +T  Q+ +    I++E  K G
Sbjct:  173 VWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYSVPDYVRVSMDCIHLLSRIFVGNPQQRITIPEIKNHPWFLKRLPVEMTDEYQRSMQLADMNTPSQSLEEAMAIIQEAQKPG 292          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: PPK1_SCHPO (Serine/threonine-protein kinase ppk1 OS=Schizosaccharomyces pombe GN=ppk1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDD-------ENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHL 244
            +WSCGVILYA+  G LPFDD       EN+P L++ I       P      ARD++ ++L+ DP KR+ +  I  H + ++H+
Sbjct:  696 IWSCGVILYAMLAGYLPFDDDPHNPNGENVPRLYRYICSTPLIFPEFFKSKARDILKKILVPDPAKRVRMSAIMNHAYLRSHV 778          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEE 307
            VWSCGVIL+ L  G LPF D N+  L+KKI       P+ L+PGA+ L+ R+L  +P  R++  +I +  WF+  L   +     +++++  ++D E
Sbjct:  195 VWSCGVILFVLLAGYLPFRDSNLMELYKKIGKAEVKFPNWLAPGAKRLLKRILDPNPNTRVSTEKIMKSSWFRKGLQEEV----KESVEEETEVDAE 287          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHL 244
            +WSCGV+L+ L  G LPF D N+  +++KI    +  PS  +P  R L+ +ML  +P  RITI  IR+  WF+  L
Sbjct:  195 IWSCGVVLFVLLAGYLPFHDSNLMEMYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPETRITIARIRESSWFRKGL 270          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KCC2B_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Bos taurus GN=CAMK2B PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPS----HLSPGARDLIPRMLIVDPMKRITIPEIRQHPW 229
            +W+CGVILY L  G  PF DE+   L+++IK G Y  PS     ++P A++LI +ML ++P KRI   E  +HPW
Sbjct:  197 IWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIMAHEALKHPW 271          
The following BLAST results are available for this feature:
BLAST of CF834842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
CSKP_HUMAN1.341e-1139.39Peripheral plasma membrane protein CASK OS=Homo sa... [more]
CIPK5_ORYSJ1.341e-1134.04CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
KIN4_YEAST1.751e-1138.46Serine/threonine-protein kinase KIN4 OS=Saccharomy... [more]
CIPK9_ARATH1.751e-1136.04CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKM_ORYSJ2.287e-1146.58CBL-interacting protein kinase 22 OS=Oryza sativa ... [more]
AAIP_WHEAT2.287e-1135.00Abscisic acid-inducible protein kinase (Fragment) ... [more]
PPK1_SCHPO2.987e-1138.55Serine/threonine-protein kinase ppk1 OS=Schizosacc... [more]
CIPKF_ARATH2.987e-1136.08CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKA_ARATH2.987e-1142.11CBL-interacting serine/threonine-protein kinase 10... [more]
KCC2B_BOVIN3.901e-1145.33Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834842 ID=CF834842; Name=CF834842; organism=Citrus sinensis; type=EST; length=715bp
CTGGGCCTGACTTTATGTGTGGAGTTGTGGTGTTATATTGTATGCTCTTC
CCTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCCAACCTTTTTAAG
AAAATTAAGGGTGGGATATACACTCTGCCCAGTCATTTGTCTCCGGGTGC
AAGAGATTTGATCCCAAGGATGCTTATAGTTGATCCAATGAAACGAATCA
CCATTCCTGAGATACGTCAGCACCCATGGTTCCAAGCCCATCTTCCGCGT
TATTTAGCTGTGCCCCCTCCAGATACGATGCAACAAGCAAAAAAGATTGA
TGAGGAGATTCTTAAGGAAGTGGTTAAGATGGGATTTGACCAGAACCAAC
TGGTTGAATCTCTTCGCAATAGGTTACAAAACGAGGCTACTGTTGCATAC
TATTTGCTGTTGGACAACCGATTCCGTGTTTCCAGTGGCTACCTTGGAGC
CGAGTTTCAGGAAACTATGGAATCTGGTTTCAACCGTTTGCATCCCATTG
AACCTGCTGTATCACCTGTTGCACACCGTGCTCCAGGATTCATGGATTAT
CAAGGAATGGGTTTAAGAGGACAGTTGCCATATGAAAGGAAATGGGCTCT
TGGACTACAGTCTCGAGCCCATCCACGTGAAATAATGACAGAAGTTCTGA
AAGCTTTGCAAGAACTGAATGTGGGTTGGAAGAAGATTGGGCACTATAAC
ATGAAGTGCAGATGG
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