CF834857

Overview
NameCF834857
Unique NameCF834857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:26..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834857 vs. ExPASy Swiss-Prot
Match: API2_SOLTU (Aspartic protease inhibitor 2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 62/203 (30.54%), Postives = 100/203 (49.26%), Query Frame = 2
Query:   62 TQPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNNIGVSTKDGVRRLLLVGDHEPALNVLF 628
            +Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++G CP  V + +S     G  +R +P      +     +N++F +  +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C  +GV  ++G RRL LV  +E  L+VLF
Sbjct:   24 SQNLIDLPSESPLPKPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDGPCPDGVFRYNSDVGPSGTFVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
BLAST of CF834857 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 55/192 (28.65%), Postives = 95/192 (49.48%), Query Frame = 2
Query:   62 TQPLLGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNNIGVSTKDGVRRLLLVGDH 604
            +Q  + + S++ PVLD+ G ++   L Y++I +  GA G   +LG    ++  C   V + +S     G  +R +   ++    +     +N++F +  +VK C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP    S  + C  +GV  ++G RRL LV D+
Sbjct:   23 SQNPINLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDIS-TVKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCP--FSSDDQFCLKVGVVHQNGKRRLALVKDN 203          
BLAST of CF834857 vs. ExPASy Swiss-Prot
Match: API8_SOLTU (Aspartic protease inhibitor 8 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 60/203 (29.56%), Postives = 95/203 (46.80%), Query Frame = 2
Query:   62 TQPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNNIGVSTKDGVRRLLLVGDHEPALNVLF 628
            +Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P           ++    P   +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C  +GV  ++G RRL LV  +E  L+VLF
Sbjct:   24 SQNLIDLPSESPLPKPVLDTNGKELNPDSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
The following BLAST results are available for this feature:
BLAST of CF834857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
API2_SOLTU2.130e-1130.54Aspartic protease inhibitor 2 OS=Solanum tuberosum... [more]
SPI5_SOLTU8.094e-1128.65Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
API8_SOLTU8.094e-1129.56Aspartic protease inhibitor 8 OS=Solanum tuberosum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834857 ID=CF834857; Name=CF834857; organism=Citrus sinensis; type=EST; length=685bp
TGGCAAAAAAACGATGACTTCATTGATAACAACACTCTCCTTCCTTATCC
TTCCCTTGGCCACGCAGCCTCTATTGGGCATCTCATCAAACTCTGAACCT
GTCTTAGATATCATTGGCAACAAGGTCAAATCCACCCTCGAGTATAAACT
TATCCCAGTCCTAGATGGCGCCGGTGGATTCAGCACACACCTAGGCACAA
ATGGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTCCTAGCGAAAGG
GGAGATAATTTAAGATTACTTCCGTACGACAATTACAAAATTGTCAAGGT
ATCCACTGATGTCAACCTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCT
GTAATGAAGAACCATTGTGGAAAGTTGATAGCTATGACGATCCATTAATT
GTAACCGGCGGAAGTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTG
GTTTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATA
TTGTCCATTGTCCGAGTGTCTGTCTATCTTGTCCTAGACGCTGCAACAAT
ATTGGCGTTTCAACTAAGGATGGCGTTCGACGTCTGCTTCTAGTTGGTGA
TCATGAACCGGCTTTGAATGTTCTGTTTTTTCCATCAGAGGAAAGCTCAA
GGCTACTTCAAGCTGCTAACGCAATATCAAGGTTT
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